{"id":"W2994653856","doi":"10.1101/2019.12.23.887034","title":"Genome sequencing and functional characterization of a <i>Dictyopanus pusillus</i> fungal extract offers a promising alternative for lignocellulose pretreatment of oil palm residues","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Enzyme-mediated dye degradation","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; PROTEO; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Universidad Industrial de Santander; Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)","keywords":"Laccase; Lignin; Lignocellulosic biomass; Biology; Biomass (ecology); Fermentation; ABTS; Solid-state fermentation; Fungus; Microorganism; Chemistry; Botany; Enzyme; Food science; Biochemistry; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004998395,0.0003820929,0.0005525977,0.00008401021,0.0001085957,0.00007865611,0.0002115421,0.0003393622,0.0000202752],"category_scores_gemma":[0.0001637092,0.0002201191,0.0001374735,0.0002867565,0.000103385,0.0002190322,0.0001693841,0.0002360215,0.000002165119],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002390132,"about_ca_system_score_gemma":0.000181594,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001119773,"about_ca_topic_score_gemma":0.00001072742,"domain_scores_codex":[0.9978108,0.000127091,0.0006278183,0.0007275011,0.0003964764,0.0003102721],"domain_scores_gemma":[0.9977998,0.0002175392,0.001051862,0.0002049186,0.00060611,0.0001198201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001431227,0.0001047292,0.01274851,0.000421097,0.0001312519,0.000003732662,0.0000370075,0.00005656923,0.986271,0.00004279413,0.000002319893,0.00003786329],"study_design_scores_gemma":[0.0003342994,0.000208623,0.3674417,0.0003602862,0.000103959,3.899828e-8,0.000009325468,0.0005206324,0.6306568,0.000002858233,0.00008173793,0.0002797686],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962301,0.0004372609,0.0002554136,0.00008442487,0.0003767326,0.0008929525,0.001643287,0.00007470378,0.000005084998],"genre_scores_gemma":[0.9983069,0.0004070156,0.0007031828,0.00002712209,0.000337775,0.0001563823,0.0000380651,0.00001169403,0.00001184418],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3556142,"threshold_uncertainty_score":0.8976198,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02214904242542832,"score_gpt":0.1966941354111394,"score_spread":0.1745450929857111,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}