{"id":"W2994900095","doi":"10.3390/microorganisms8010023","title":"Tetracycline Resistant Campylobacter jejuni Subtypes Emanating from Beef Cattle Administered Non-Therapeutic Chlortetracycline are Longitudinally Transmitted within the Production Continuum but are Not Detected in Ground Beef","year":2019,"lang":"en","type":"article","venue":"Microorganisms","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Alberta Livestock and Meat Agency","keywords":"Tetracycline; Chlortetracycline; Campylobacter jejuni; Campylobacter; Beef cattle; Microbiology; Antibiotics; Biology; Food science; Animal science; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007461521,0.000461562,0.0007307905,0.00004886293,0.0002840855,0.0001334566,0.0006340454,0.0003504324,0.0004869337],"category_scores_gemma":[0.000271662,0.0002032125,0.0001656026,0.0006855793,0.000181528,0.0001949364,0.00008718715,0.000599349,0.0001507638],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001023806,"about_ca_system_score_gemma":0.00002957991,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001744598,"about_ca_topic_score_gemma":0.04163486,"domain_scores_codex":[0.9968476,0.0003652093,0.000967619,0.0009015427,0.0002849775,0.0006330332],"domain_scores_gemma":[0.9979153,0.0007474644,0.0007069648,0.0003245413,0.0001864933,0.0001192195],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003489742,0.0002081409,0.2028106,0.00001699316,0.00006256529,0.00001850948,0.0003967156,0.000003236767,0.7949162,0.000004782867,0.00007938351,0.001133961],"study_design_scores_gemma":[0.0004824976,0.0002744575,0.851888,0.0001300524,0.00006542835,0.00002679765,0.002234773,0.0000183043,0.1437878,0.0002355803,0.0004571943,0.000399071],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.991518,0.0003874013,0.000008812119,0.006132271,0.0007969379,0.000831267,0.0001820895,0.0001063249,0.00003686409],"genre_scores_gemma":[0.9968491,0.00003305178,0.0001141464,0.001159087,0.0005249248,0.00002951245,0.0002227534,0.00001346856,0.001053916],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6511284,"threshold_uncertainty_score":0.9758528,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0211364641029679,"score_gpt":0.2289395962491788,"score_spread":0.2078031321462109,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}