{"id":"W2995017361","doi":"10.1093/femsec/fiz198","title":"Genomic and gene expression evidence of nonribosomal peptide and polyketide production among ruminal bacteria: a potential role in niche colonization?","year":2019,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Instituto Nacional de Ciência e Tecnologia de Ciência Animal; Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Queen's University; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Research Councils UK","keywords":"Biology; Nonribosomal peptide; Polyketide; Gene; Genome; Rumen; Genetics; Biochemistry; Biosynthesis","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002299709,0.0002421645,0.0003163229,0.0005935226,0.0001912248,0.0004372473,0.0001224878,0.0003703984,0.0006400748],"category_scores_gemma":[0.0003945459,0.0001404,0.0002598956,0.000660445,0.0003121685,0.0002606286,0.0003447633,0.0002310735,0.000289506],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001177327,"about_ca_system_score_gemma":0.0001992236,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007437879,"about_ca_topic_score_gemma":0.0007354144,"domain_scores_codex":[0.9997371,0.00003526208,0.00001772296,0.0001153454,0.00003625925,0.00005825322],"domain_scores_gemma":[0.9996618,0.00008152996,0.00009213416,0.00002827376,0.00006300597,0.00007321622],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002680315,0.00002716634,0.02660648,0.0001407575,0.00002690624,0.0001276015,0.0002198155,0.00008322872,0.9674058,0.00006506192,0.00002061907,0.005008583],"study_design_scores_gemma":[0.000008974451,0.0003565027,0.947082,0.00002636563,0.00007347867,0.0007725926,0.0007213273,0.001058383,0.04852551,0.0001820631,0.001177731,0.00001492749],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974771,0.0007522056,0.0006219471,0.0000261733,0.000002981121,0.000006698023,0.0007339746,0.000007233786,0.0003716797],"genre_scores_gemma":[0.9967236,0.0003873467,0.001081587,0.00003243924,0.000008540819,0.00001412394,0.001332469,0.000004694492,0.0004152876],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007437879,"threshold_uncertainty_score":0.002141237,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004150048341410716,"score_gpt":0.1989072016645755,"score_spread":0.1947571533231648,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}