{"id":"W2995217039","doi":"10.1186/s40643-019-0286-0","title":"CAZymes-based ranking of fungi (CBRF): an interactive web database for identifying fungi with extrinsic plant biomass degrading abilities","year":2019,"lang":"en","type":"article","venue":"Bioresources and Bioprocessing","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs","keywords":"Biology; Ranking (information retrieval); Web page; Computer science; Database; World Wide Web; JavaScript; Information retrieval","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002293692,0.0002372162,0.0002671574,0.000269207,0.0001508158,0.0001431429,0.0001286757,0.00009387347,0.00002399413],"category_scores_gemma":[0.000007212268,0.0001822512,0.00005692361,0.0002339993,0.0001072221,0.0004501304,0.0000321368,0.0001144403,0.000001763202],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003926471,"about_ca_system_score_gemma":0.00002998649,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005086669,"about_ca_topic_score_gemma":0.00001837715,"domain_scores_codex":[0.9988797,0.00001851841,0.0002634322,0.0003806149,0.0001783194,0.0002793796],"domain_scores_gemma":[0.9994499,0.00006847036,0.0001217087,0.0002000745,0.00007274458,0.00008707755],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005269398,0.0000590341,0.01478907,0.005460729,0.00007776557,0.000003701313,0.001266254,0.0001106688,0.9530447,0.00002048817,0.00004488355,0.02459575],"study_design_scores_gemma":[0.002532499,0.0004497202,0.002282395,0.001647102,0.0001269462,0.00004142976,0.008527188,0.1513532,0.8233939,0.00002545296,0.008856547,0.0007635923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992345,0.004803095,0.001873302,0.00003463285,0.0002396441,0.0003309278,0.0001232161,0.0001809774,0.00006917895],"genre_scores_gemma":[0.9970407,0.00006792213,0.002571841,0.00002338642,0.0001140446,0.00001064731,0.00009702932,0.00003647802,0.00003788319],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1512426,"threshold_uncertainty_score":0.7431987,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02141460508741238,"score_gpt":0.2362050591729905,"score_spread":0.2147904540855781,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}