{"id":"W2995235985","doi":"10.1177/1040638719896283","title":"Diversity of <i>Mycoplasma hyopneumoniae</i> strains from pigs across Ontario, Canada","year":2019,"lang":"en","type":"article","venue":"Journal of Veterinary Diagnostic Investigation","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Mycoplasma hyopneumoniae; Enzootic; Biology; Multilocus sequence typing; Genotype; Typing; Strain (injury); Veterinary medicine; Molecular epidemiology; Genetic diversity; Microbiology; Virology; Genetics; Gene; Population; Virus; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004000146,0.00033068,0.0002961488,0.00166952,0.002374124,0.001126591,0.0005416721,0.0003395026,0.0009256944],"category_scores_gemma":[0.0007475213,0.0002961394,0.0003149258,0.002201052,0.0007339085,0.0001908792,0.0004831071,0.0002762746,0.0001759859],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01064148,"about_ca_system_score_gemma":0.01206405,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9780827,"about_ca_topic_score_gemma":0.9928916,"domain_scores_codex":[0.9993889,0.00003163622,0.00003447727,0.0001251739,0.0001904801,0.0002293194],"domain_scores_gemma":[0.9989421,0.0000643438,0.0001746867,0.00003389762,0.0005444715,0.0002405661],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002324589,0.00003133712,0.9667735,0.0001100317,0.00007361777,0.000571036,0.003507269,0.0001705438,0.01719153,0.0001068235,0.001073125,0.0101589],"study_design_scores_gemma":[0.000002852533,0.00002554731,0.9971464,0.00002413704,0.00001212937,0.0001142366,0.001023642,0.00007671503,0.0002928295,0.000005271685,0.00127011,0.000006119707],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939167,0.0004758812,0.0001809874,0.0001241116,0.00001247465,0.00005496235,0.001944063,0.00001040253,0.003280425],"genre_scores_gemma":[0.9961671,0.0005091206,0.0003220325,0.0001282345,0.000005272437,0.00001771704,0.001519669,0.000007862383,0.001322964],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02191734,"threshold_uncertainty_score":0.07720977,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02329418532583096,"score_gpt":0.2512287522532306,"score_spread":0.2279345669273996,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}