{"id":"W2996472869","doi":"10.1128/mbio.02243-19","title":"Host-Microbe Interactions in the Chemosynthetic <i>Riftia pachyptila</i> Symbiosis","year":2019,"lang":"en","type":"article","venue":"mBio","topic":"Marine Biology and Ecology Research","field":"Earth and Planetary Sciences","cited_by":61,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Deutsche Forschungsgemeinschaft; Canada Foundation for Innovation; Natural Sciences and Engineering Research Council of Canada; Government of Alberta; Woods Hole Oceanographic Institution; Deutscher Akademischer Austauschdienst; National Science Foundation","keywords":"Symbiosis; Chemosynthesis; Biology; Host (biology); Mutualism (biology); Metaproteomics; Population; Ecology; Evolutionary biology; Bacteria; Hydrothermal vent; Metagenomics; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000104579,0.0003561981,0.0002429246,0.0002866318,0.0003309674,0.0005064592,0.0002135047,0.0003467338,0.0005417505],"category_scores_gemma":[0.0001290027,0.0001631523,0.0001821668,0.0002610088,0.0002882187,0.0005101242,0.0004942008,0.0002891363,0.0001502513],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002856802,"about_ca_system_score_gemma":0.0002123947,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00129664,"about_ca_topic_score_gemma":0.00207698,"domain_scores_codex":[0.9999114,0.00001321308,0.000005484495,0.0000261736,0.00002154193,0.00002215859],"domain_scores_gemma":[0.9999037,0.00001516603,0.00004841816,0.000005156089,0.00000920683,0.00001846694],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000660516,0.00001711125,0.01170759,0.00007376105,0.00001509515,0.0001427484,0.00009296816,0.0002161577,0.9845755,0.0001590093,0.00002270266,0.002911227],"study_design_scores_gemma":[0.00002721709,0.0006230355,0.7181304,0.0000395199,0.0001281679,0.001008141,0.0009518285,0.007405677,0.2663012,0.0007135021,0.004634606,0.00003682223],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982179,0.0005433155,0.0005159925,0.00003923546,0.000002495065,0.000007165472,0.00009140892,0.00001447135,0.00056812],"genre_scores_gemma":[0.9985238,0.0002370803,0.0008624698,0.00001648347,0.00000235374,0.00001002303,0.0001098303,0.000002969875,0.000235127],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00129664,"threshold_uncertainty_score":0.002578199,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01392569324513828,"score_gpt":0.2350629341454747,"score_spread":0.2211372409003364,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}