{"id":"W2996641117","doi":"10.3390/pathogens9010003","title":"Genetic Changes in Experimental Populations of a Hybrid in the Cryptococcus neoformans Species Complex","year":2019,"lang":"en","type":"article","venue":"Pathogens","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Cryptococcus neoformans; Biology; Cryptococcus; Cryptococcosis; Evolutionary biology; Microbiology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007337737,0.00006533568,0.0001572663,0.0001070325,0.00003202963,0.000004170154,0.00003860978,0.00001250613,0.0002463021],"category_scores_gemma":[0.00001178229,0.00004512495,0.00003872087,0.0001563078,0.00003503491,0.00001499672,0.00002430896,0.00006177423,0.00002093614],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003117028,"about_ca_system_score_gemma":0.000008999176,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00010513,"about_ca_topic_score_gemma":0.0005121465,"domain_scores_codex":[0.9995237,0.00002584876,0.0001426851,0.00008657294,0.00009526853,0.0001259065],"domain_scores_gemma":[0.9997662,0.00002558942,0.00002900077,0.0001469002,0.0000183367,0.00001397191],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00001919231,0.0002352341,0.858258,0.00003020848,0.000008942335,0.00002093377,0.003154658,0.00007645974,0.1371255,0.0006038175,0.0002740594,0.0001929775],"study_design_scores_gemma":[0.0004576337,0.0002110738,0.9907072,0.00002779392,0.000009188989,0.00002964228,0.00320884,0.0004628201,0.00327849,0.00003413873,0.001523189,0.00004997763],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9912392,0.000300578,0.00001060084,0.0003075449,0.00007811408,0.0004517381,0.00002023234,0.000007235778,0.007584716],"genre_scores_gemma":[0.9992836,0.00003495927,0.0003170007,0.0001338838,0.00004067023,0.00005285804,0.00001118755,0.000005252477,0.0001206184],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.133847,"threshold_uncertainty_score":0.2696836,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06586289220022964,"score_gpt":0.3065785762887466,"score_spread":0.2407156840885169,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}