{"id":"W2996887063","doi":"10.1093/bioinformatics/btz918","title":"MLDSP-GUI: an alignment-free standalone tool with an interactive graphical user interface for DNA sequence comparison and analysis","year":2019,"lang":"en","type":"article","venue":"Bioinformatics","topic":"Fractal and DNA sequence analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo; Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Graphical user interface; Executable; Computer science; Graphical user interface testing; Software; User interface; Open source; Source code; Data mining; Programming language; Python (programming language); User interface design","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002230752,0.003163796,0.002217618,0.003425674,0.0008865024,0.00210579,0.004010074,0.001446345,0.1207807],"category_scores_gemma":[0.006549474,0.00115134,0.001645302,0.002315725,0.0004827676,0.002596321,0.002935112,0.002260639,0.0972199],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005971142,"about_ca_system_score_gemma":0.001467318,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002197508,"about_ca_topic_score_gemma":0.002845996,"domain_scores_codex":[0.9985805,0.0002113781,0.0001256097,0.0004827711,0.0004457347,0.0001540755],"domain_scores_gemma":[0.997575,0.001197694,0.0002081739,0.0003656979,0.000417719,0.000235639],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008815591,0.0001399761,0.002723757,0.001893796,0.0002385965,0.0002698367,0.0001905678,0.001565451,0.0127916,0.001898893,0.902696,0.07471003],"study_design_scores_gemma":[0.001054931,0.0002557699,0.01149341,0.0006445072,0.0002023409,0.00111677,0.0001863869,0.04968977,0.04482009,0.01590234,0.8741862,0.0004473765],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.004605366,0.0003658966,0.1366414,0.0003424335,0.0002974393,0.0003479548,0.2905904,0.5613472,0.005461974],"genre_scores_gemma":[0.02632619,0.0003991217,0.2215564,0.0008222615,0.0001342925,0.002350926,0.6416045,0.09664858,0.01015769],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.1207807,"threshold_uncertainty_score":0.4040517,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01324810595884197,"score_gpt":0.2835636738212264,"score_spread":0.2703155678623844,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}