{"id":"W2997679804","doi":"10.3747/co.26.5379","title":"Inter-Laboratory Proficiency Testing Scheme for Tumour Next-Generation Sequencing in Ontario: A Pilot Study","year":2019,"lang":"en","type":"article","venue":"Current Oncology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Western University; Kingston Health Sciences Centre; University of Ottawa; St. Joseph’s Healthcare Hamilton; University Health Network; Ottawa Hospital; Princess Margaret Cancer Centre; London Health Sciences Centre; McMaster University; Queen's University; Hamilton Health Sciences","funders":"","keywords":"Medicine; DNA sequencing; Medical physics; Computational biology; Genetics; Biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.02333641,0.0004718897,0.0004060726,0.000985719,0.003280553,0.001647283,0.001981203,0.000789052,0.002340731],"category_scores_gemma":[0.01995823,0.0005622298,0.0005625857,0.001440937,0.002287111,0.000554165,0.00178832,0.0006000769,0.000714028],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.02064394,"about_ca_system_score_gemma":0.04065955,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7202563,"about_ca_topic_score_gemma":0.740909,"domain_scores_codex":[0.9813246,0.004618321,0.0009396291,0.001864023,0.009544488,0.001708979],"domain_scores_gemma":[0.9559332,0.006469567,0.004062385,0.004100058,0.02622052,0.003214292],"domain_codex":null,"domain_gemma":"methods","domain_candidate":"methods","domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.005307272,0.00246773,0.7498965,0.001108522,0.0002379303,0.00241036,0.03544499,0.003875928,0.06797121,0.001915529,0.009690831,0.1196733],"study_design_scores_gemma":[0.0003165371,0.004396108,0.9399957,0.0001369255,0.0001103282,0.0007451832,0.004849326,0.003623809,0.01048797,0.0001888744,0.03506445,0.00008485157],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9671288,0.0005287481,0.01277125,0.0009649433,0.00005728708,0.006255206,0.001902521,0.0003096798,0.01008156],"genre_scores_gemma":[0.9743595,0.0003054359,0.01631518,0.0005924954,0.00003150321,0.001744529,0.002449851,0.00009403588,0.004107479],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9793561,"threshold_uncertainty_score":0.5627824,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2124286777857285,"score_gpt":0.3625207968916092,"score_spread":0.1500921191058806,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}