{"id":"W2997740011","doi":"10.3390/ijms21010321","title":"Histone Deacetylase (HDAC) Gene Family in Allotetraploid Cotton and Its Diploid Progenitors: In Silico Identification, Molecular Characterization, and Gene Expression Analysis under Multiple Abiotic Stresses, DNA Damage and Phytohormone Treatments","year":2020,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"Research in Cotton Cultivation","field":"Agricultural and Biological Sciences","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Higher Education Commision, Pakistan","keywords":"Biology; Gossypium; Gene; Histone deacetylase; Abiotic stress; Genetics; Gene family; Histone; Arabidopsis; Gossypium barbadense; Gene expression; Mutant","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000443236,0.0001444216,0.0002165151,0.0001948707,0.00008859344,0.0002263688,0.0003390179,0.00006302093,0.000007568085],"category_scores_gemma":[0.0002475758,0.00007972513,0.00005230311,0.0008225188,0.0001437018,0.0005707605,0.0001140867,0.0001192826,6.068509e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006637907,"about_ca_system_score_gemma":0.00003269191,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007155814,"about_ca_topic_score_gemma":0.0000483013,"domain_scores_codex":[0.9980419,0.000177789,0.0004920654,0.0003727761,0.0007395099,0.0001760149],"domain_scores_gemma":[0.9991068,0.0001011582,0.0003122097,0.00003871606,0.0002819008,0.0001592071],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004713203,0.0001141318,0.02983571,0.000004444612,0.00006767077,0.0000597934,0.000279127,0.0002534736,0.9668837,0.00002198755,0.000001518727,0.002431352],"study_design_scores_gemma":[0.0003832636,0.0001311209,0.4763149,0.00002559851,0.00002186658,0.000008645393,0.0001734221,0.002754484,0.5200344,0.00004979944,0.00001503257,0.00008753794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948153,0.001828547,0.0004564892,0.002603221,0.00004349599,0.0002110398,0.00003203721,0.000007232794,0.000002597461],"genre_scores_gemma":[0.9984288,0.0008749533,0.000375598,0.0002017232,0.00004866692,0.000008278949,0.00005496837,0.000002062003,0.000004904034],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4468493,"threshold_uncertainty_score":0.3251096,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02908898662429469,"score_gpt":0.286591239698559,"score_spread":0.2575022530742643,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}