{"id":"W2997886482","doi":"10.3390/microorganisms8010060","title":"Probiotic Supplementation in a Clostridium difficile-Infected Gastrointestinal Model Is Associated with Restoring Metabolic Function of Microbiota","year":2019,"lang":"en","type":"article","venue":"Microorganisms","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs; McGill University","keywords":"Probiotic; Clostridium difficile; Gut flora; Microbiology; Biology; Clostridium; Lactobacillus; Feces; Prebiotic; Short-chain fatty acid; Antibiotics; Microbiome; Butyrate; Bacteria; Food science; Immunology; Fermentation; Bioinformatics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003102279,0.0006558051,0.0009445511,0.0005320766,0.0003571318,0.0003733661,0.0003539356,0.0006428754,0.00119754],"category_scores_gemma":[0.0002108782,0.0002260776,0.0004484406,0.0003526127,0.0003887476,0.0003550769,0.0003550148,0.001518217,0.0001903912],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000293098,"about_ca_system_score_gemma":0.0005489468,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007889092,"about_ca_topic_score_gemma":0.001732915,"domain_scores_codex":[0.99967,0.00006428307,0.00003031414,0.00006720445,0.00007210522,0.00009615932],"domain_scores_gemma":[0.9997553,0.00001886675,0.00005357559,0.00001801322,0.00002503331,0.0001291965],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.005381397,0.00208042,0.0003824996,0.0001575234,0.00002330329,0.0001582543,0.00006151879,0.00009623529,0.988001,0.00008120688,0.0001234555,0.003453104],"study_design_scores_gemma":[0.0005573456,0.06192408,0.01564743,0.00009142602,0.0002099717,0.0005184875,0.000298452,0.001815006,0.9146563,0.0002144124,0.004023357,0.00004365751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960864,0.001637321,0.0007638674,0.0002313162,0.0001546998,0.00007242626,0.0002173211,0.00005569661,0.0007809595],"genre_scores_gemma":[0.9890853,0.002279532,0.003512961,0.0002326536,0.00005417305,0.0001942531,0.0005581796,0.0000247222,0.004058361],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00119754,"threshold_uncertainty_score":0.004006207,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0159919214601056,"score_gpt":0.2566288543772449,"score_spread":0.2406369329171393,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}