{"id":"W2997906114","doi":"10.1186/s12864-019-6408-4","title":"Effect of growth rate on transcriptomic responses to immune stimulation in wild-type, domesticated, and GH-transgenic coho salmon","year":2019,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Fisheries and Oceans Canada","funders":"College of Medicine and Veterinary Medicine, University of Edinburgh; Biotechnology and Biological Sciences Research Council; Fisheries and Oceans Canada; Korea Polar Research Institute","keywords":"Biology; Immune system; Stimulation; Transcriptome; Receptor; Wild type; Transgene; Internal medicine; Endocrinology; Gene expression; Gene; Immunology; Genetics; Mutant","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004025027,0.0001323108,0.0001840914,0.00008355455,0.00002069684,0.000008142632,0.00008115473,0.0001121538,0.000003760054],"category_scores_gemma":[0.00006153399,0.0001209479,0.00004788312,0.0001051857,0.00003836902,0.000002267732,0.0000240115,0.00005988732,0.00001308564],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001804156,"about_ca_system_score_gemma":0.00004703171,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002841341,"about_ca_topic_score_gemma":0.00001939704,"domain_scores_codex":[0.9991074,0.0001350588,0.0002166276,0.0003447566,0.00005594134,0.0001402702],"domain_scores_gemma":[0.9995804,0.00003895797,0.00005322374,0.0002433765,0.00004257702,0.00004150429],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004590183,0.00002850646,0.02108607,0.000069043,0.00001636416,2.983532e-7,0.00007471912,0.003201647,0.9704797,0.00001952524,0.000006370099,0.0004275952],"study_design_scores_gemma":[0.001147037,0.002850203,0.1438527,0.00002020245,0.00002833323,0.000004790265,0.00001751442,0.0003018064,0.8513476,0.00003076506,0.0002471568,0.0001519669],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984153,0.0005175922,0.0002760723,0.00003369931,0.000155368,0.0005324811,0.000008343432,0.000005082305,0.00005609108],"genre_scores_gemma":[0.9990807,0.0002778161,0.0002669226,0.00001953181,0.00004675159,0.000006839706,0.00003424001,0.00002285675,0.0002443421],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1227666,"threshold_uncertainty_score":0.4932114,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007984853910481829,"score_gpt":0.2495141542499704,"score_spread":0.2415293003394886,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}