{"id":"W2998233166","doi":"10.1016/j.meegid.2019.104168","title":"Epidemiological investigation and genomic characterization of Caprine herpesvirus 1 from goats in China","year":2019,"lang":"en","type":"article","venue":"Infection Genetics and Evolution","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"ca_institutions":"Ministry of Agriculture","funders":"National Key Research and Development Program of China Stem Cell and Translational Research; Jiangsu Key Laboratory of Photonic Manufacturing Science and Technology; Jiangsu Agricultural Science and Technology Independent Innovation Fund; Ministerio de Ciencia y Tecnología; National Natural Science Foundation of China","keywords":"Biology; Genome; Genetics; Phylogenetic tree; Virology; Population; Subfamily; Reference genome; Virus; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001405928,0.00009832365,0.0002066122,0.0001272381,0.00003494054,0.000007273101,0.000009663308,0.0001256634,0.00004733058],"category_scores_gemma":[0.00002717177,0.0000876918,0.00002565946,0.0001333151,0.00004920237,0.00006149976,0.00002206158,0.0000909838,0.00001351029],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008991409,"about_ca_system_score_gemma":0.00002592247,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001964396,"about_ca_topic_score_gemma":0.0001009528,"domain_scores_codex":[0.9993171,0.00006119205,0.0002586266,0.0002034875,0.00006157583,0.00009799668],"domain_scores_gemma":[0.999676,0.00002338763,0.0001009078,0.0001047163,0.00003455044,0.00006044799],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003123145,0.00005571908,0.8682047,0.0000227111,0.00001884241,4.90566e-7,0.00006725453,0.00005967635,0.1167173,0.0001205201,0.000001165164,0.01470036],"study_design_scores_gemma":[0.0008950992,0.000213932,0.9894066,0.00004994428,0.0000348597,0.0000108447,0.0000042353,0.005550717,0.002360349,0.0008925715,0.0005104531,0.00007035239],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984042,0.0002424159,0.0006201818,0.00008134412,0.0001455069,0.0003224704,0.00001248401,0.00001962976,0.0001517521],"genre_scores_gemma":[0.9984568,0.001057854,0.0002501453,0.00003848539,0.00005140979,0.00001223988,0.00008552759,0.000008069149,0.00003949217],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1212019,"threshold_uncertainty_score":0.3575968,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01467235354809908,"score_gpt":0.2505665628368815,"score_spread":0.2358942092887824,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}