{"id":"W2998541854","doi":"10.3390/life10010002","title":"Ultradeep Microbial Communities at 4.4 km within Crystalline Bedrock: Implications for Habitability in a Planetary Context","year":2020,"lang":"en","type":"article","venue":"Life","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Jenny ja Antti Wihurin Rahasto; Eidgenössische Technische Hochschule Zürich; First Quantum Minerals; University of St Andrews; Royal Society of Edinburgh","keywords":"Bedrock; Metagenomics; Biology; Context (archaeology); Phylotype; Geomicrobiology; Ecology; Environmental DNA; Microbial ecology; 16S ribosomal RNA; Biodiversity; Environmental biotechnology; Paleontology; Gene; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001660859,0.0001192697,0.0002195561,0.00001330562,0.0002868777,0.00000875714,0.0004042092,0.0001116839,0.002210498],"category_scores_gemma":[0.00008851368,0.0001230121,0.00005200421,0.0000947644,0.0003368571,0.00007468938,0.000272975,0.0002696546,0.0001416444],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006940262,"about_ca_system_score_gemma":0.0000188344,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001530628,"about_ca_topic_score_gemma":0.05002771,"domain_scores_codex":[0.9990839,0.0002269007,0.000278334,0.0001628674,0.00002926285,0.0002187285],"domain_scores_gemma":[0.9991016,0.0004214804,0.00007508789,0.0002892876,0.000005849297,0.000106727],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001089014,0.0005217757,0.6233968,0.0001005627,0.00005191145,0.000001376495,0.02504826,0.006473146,0.2686905,0.00112021,0.07318252,0.0003239951],"study_design_scores_gemma":[0.002754051,0.000754452,0.859134,0.00001815047,0.00003841555,0.00001972238,0.003300017,0.002012762,0.001832077,0.004013879,0.125459,0.0006634791],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.989589,0.00003462931,0.00009730054,0.008842506,0.00004305188,0.000419621,0.0003535394,0.0000344488,0.0005859103],"genre_scores_gemma":[0.9889039,0.000006698168,0.0004549408,0.009787802,0.0000371807,0.00003876457,0.0007206489,0.000009123627,0.00004088684],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2668584,"threshold_uncertainty_score":0.9987016,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03885402412026925,"score_gpt":0.2373170553222276,"score_spread":0.1984630312019584,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}