{"id":"W2998802896","doi":"10.1101/2020.01.19.911776","title":"Diagnostic of begomoviruses in complex infections –a case study","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Deutscher Akademischer Austauschdienst","keywords":"Biology; Begomovirus; Virology; Geminiviridae; Vector (molecular biology); Sida; Viral disease; Plant virus; Virus; Genetics; Gene; Recombinant DNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009448756,0.0008563302,0.0003432686,0.002284315,0.001739622,0.001339826,0.0005393724,0.002547699,0.001802262],"category_scores_gemma":[0.00201187,0.0005124625,0.0005224757,0.0006476189,0.001271733,0.000777897,0.001280611,0.001373217,0.0005511044],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007515032,"about_ca_system_score_gemma":0.0002657933,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001623335,"about_ca_topic_score_gemma":0.002025327,"domain_scores_codex":[0.99925,0.0001898733,0.00005780887,0.0001777608,0.0001453677,0.0001791994],"domain_scores_gemma":[0.9990525,0.0003600774,0.0001190409,0.0001237714,0.00009257487,0.0002519882],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"case_report","study_design_gemma":"case_report","study_design_scores_codex":[0.0002978842,0.0005617573,0.05497248,0.0001597957,0.00003883551,0.9134085,0.0024355,0.0002172708,0.01596961,0.001038071,0.000734157,0.01016608],"study_design_scores_gemma":[0.00001757379,0.0003507515,0.02116309,0.00003981908,0.00003236324,0.9659651,0.001261965,0.0008185745,0.006446491,0.0004887978,0.003392633,0.00002283878],"study_design_candidate":"case_report","study_design_consensus":"case_report","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9867486,0.001721518,0.004441566,0.0004955464,0.00007675063,0.000212956,0.0001339207,0.00006004758,0.00610924],"genre_scores_gemma":[0.9942182,0.001064442,0.002955692,0.0001795896,0.0001148232,0.00002392052,0.000111457,0.00002690236,0.001304959],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002547699,"threshold_uncertainty_score":0.006029189,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07253038735449335,"score_gpt":0.2787534714793106,"score_spread":0.2062230841248172,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}