{"id":"W2999435376","doi":"10.1128/mra.00829-19","title":"Genome Sequence of a Klebsiella pneumoniae NDM-1 Producer Isolated in Quebec City","year":2020,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de Santé Publique du Québec; Université Laval","funders":"Fonds de Recherche du Québec - Santé","keywords":"Klebsiella pneumoniae; Plasmid; Whole genome sequencing; Biology; Gene; Genome; Chromosome; Genetics; Sequence (biology); Insertion sequence; Microbiology; Strain (injury); Circular bacterial chromosome; Escherichia coli; Transposable element","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008928555,0.0003548739,0.0003091988,0.0009400867,0.001209462,0.0004179307,0.0003816668,0.000398904,0.003919125],"category_scores_gemma":[0.0003329142,0.0001431044,0.0002221396,0.002118622,0.0001440638,0.0000943886,0.0001884379,0.0004215194,0.001005336],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003623074,"about_ca_system_score_gemma":0.003807273,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8242496,"about_ca_topic_score_gemma":0.8368034,"domain_scores_codex":[0.9998925,0.000005711279,0.000004429822,0.00002563507,0.0000439269,0.00002774139],"domain_scores_gemma":[0.9997573,0.00002444428,0.00002246113,0.000008293398,0.0001338834,0.00005361362],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002044473,0.0003434633,0.07527189,0.0007975962,0.0001045078,0.003676549,0.001627029,0.002178665,0.8425349,0.0007653576,0.01243124,0.0582242],"study_design_scores_gemma":[0.00009348583,0.0002783903,0.8851079,0.0001354374,0.0001339976,0.001449918,0.001768406,0.002112801,0.03322949,0.0001040938,0.07551857,0.00006751047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8129148,0.001277437,0.001776824,0.0005985831,0.00005891377,0.0002185854,0.170806,0.000170154,0.01217868],"genre_scores_gemma":[0.7347807,0.001614519,0.008330901,0.000302782,0.00001477766,0.0000863835,0.2351989,0.0000667527,0.01960432],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1757504,"threshold_uncertainty_score":0.3535709,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02154682415373456,"score_gpt":0.2357946764046107,"score_spread":0.2142478522508761,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}