{"id":"W2999435376","doi":"10.1128/mra.00829-19","title":"Genome Sequence of a Klebsiella pneumoniae NDM-1 Producer Isolated in Quebec City","year":2020,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de Santé Publique du Québec; Université Laval","funders":"Fonds de Recherche du Québec - Santé","keywords":"Klebsiella pneumoniae; Plasmid; Whole genome sequencing; Biology; Gene; Genome; Chromosome; Genetics; Sequence (biology); Insertion sequence; Microbiology; Strain (injury); Circular bacterial chromosome; Escherichia coli; Transposable element","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001417523,0.0002058562,0.0002903054,0.00004256843,0.00005103736,0.000008621395,0.0003155416,0.0001650045,0.00002024717],"category_scores_gemma":[0.00004200446,0.0002006931,0.00007385595,0.0001682184,0.0001903387,0.000001059307,0.000281792,0.0001135241,0.00001362],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000239681,"about_ca_system_score_gemma":0.00007905136,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003196682,"about_ca_topic_score_gemma":0.0004302675,"domain_scores_codex":[0.9986185,0.00008897093,0.0003620072,0.0005401713,0.00004514194,0.0003451672],"domain_scores_gemma":[0.9994241,0.00000788408,0.0001433718,0.0002844344,0.00007861554,0.00006161359],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001481701,0.00005897275,0.04088202,0.00002264295,0.0000904991,0.000004723552,0.0005404412,0.0001401772,0.9574359,0.000002128189,0.0004943576,0.0001799504],"study_design_scores_gemma":[0.001245153,0.0008831397,0.006003315,0.00002091113,0.00002728884,0.00001738385,0.0003165911,0.00002889108,0.07237009,0.00001037818,0.9186434,0.0004334472],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964906,0.001235441,0.00004118976,0.0007063497,0.0000598406,0.0003058014,0.0007273037,0.000004706975,0.0004287825],"genre_scores_gemma":[0.996824,0.0001510158,0.00009333243,0.0009754369,0.00008620029,0.00001785724,0.001050558,0.00001768868,0.0007839708],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9181491,"threshold_uncertainty_score":0.8184029,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02154682415373456,"score_gpt":0.2357946764046107,"score_spread":0.2142478522508761,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}