{"id":"W2999508025","doi":"10.1101/2020.01.08.899740","title":"Damage Repair Versus Aging in Biofilms","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Biocrusts and Microbial Ecology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Biotechnology and Biological Sciences Research Council; University of Warwick","keywords":"Multicellular organism; Biology; Soma; Senescence; Cell biology; Cell division; DNA damage; Germline; Population; Evolutionary biology; Genetics; Cell; Neuroscience; Gene; DNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003819549,0.0004559286,0.000554005,0.00005423832,0.0001437055,0.0001430386,0.0006646385,0.0006778853,0.0002980939],"category_scores_gemma":[0.000166821,0.0002452969,0.0002363389,0.0006469233,0.0001175505,0.0001009802,0.0008728344,0.000915591,0.0001458096],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001761832,"about_ca_system_score_gemma":0.0001158008,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005834433,"about_ca_topic_score_gemma":0.000380517,"domain_scores_codex":[0.9974177,0.0001554096,0.0004807995,0.001115941,0.0001813541,0.0006487925],"domain_scores_gemma":[0.998972,0.0001134967,0.0002554036,0.0002812856,0.0001252836,0.0002525481],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006070105,0.00008834437,0.004594806,0.0000669257,0.00004421041,0.0001131313,0.000004737497,0.000007164551,0.9938139,0.000398964,0.0007948034,0.00001229592],"study_design_scores_gemma":[0.001019595,0.0003459233,0.713883,0.0002857234,0.00009042611,1.650183e-8,0.00001843062,0.0002503127,0.1793989,0.000003249638,0.1031455,0.001558824],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945817,0.0004371,0.000001582705,0.002068366,0.001591332,0.0004809499,0.0002354028,0.0005530486,0.00005050295],"genre_scores_gemma":[0.9975598,0.0002087502,0.0007350503,0.0006570035,0.000760194,0.00006133924,0.000001617104,0.000009382729,0.00000679686],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.814415,"threshold_uncertainty_score":0.9999999,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02374722086475564,"score_gpt":0.2133926135638304,"score_spread":0.1896453926990747,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}