{"id":"W3000050415","doi":"10.1097/qad.0000000000002465","title":"High levels of genetically intact HIV in HLA-DR+ memory T cells indicates their value for reservoir studies","year":2020,"lang":"en","type":"article","venue":"AIDS","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Human leukocyte antigen; RNA; DNA; Virology; Immune system; Immunology; Molecular biology; Genetics; Gene; Antigen","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002167035,0.000136738,0.0003666068,0.00008315943,0.00005828498,0.000004400196,0.0002323675,0.0001150977,0.0001532523],"category_scores_gemma":[0.0002218668,0.00009697855,0.00008413959,0.0001426652,0.0002332044,0.00003374044,0.0001559198,0.0001645398,0.0002926212],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003215962,"about_ca_system_score_gemma":0.00008145939,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004284121,"about_ca_topic_score_gemma":0.000009687007,"domain_scores_codex":[0.9989336,0.0001884546,0.0002675139,0.0002480347,0.00003723792,0.000325177],"domain_scores_gemma":[0.9991291,0.0005412552,0.00005633501,0.000169087,0.00006682484,0.0000373865],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005717503,0.0003177238,0.007766159,0.0001591576,0.001232805,0.00001696768,0.003725723,0.00006664215,0.9669663,0.00188392,0.008621219,0.008671687],"study_design_scores_gemma":[0.002419212,0.001553733,0.01250331,0.00003206702,0.00003418697,0.000001703083,0.000890164,0.000003679476,0.9769967,0.0008445232,0.004607617,0.000113166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914489,0.0050875,0.00009439329,0.002079315,0.00009854309,0.000441972,0.0004977668,0.00002260152,0.0002289991],"genre_scores_gemma":[0.9978766,0.0002748331,0.000883125,0.0001818812,0.00002488364,0.00007674369,0.00007655216,0.0000130158,0.0005924033],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01003039,"threshold_uncertainty_score":0.395467,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05781555752564742,"score_gpt":0.3065556621715496,"score_spread":0.2487401046459021,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}