{"id":"W3000153037","doi":"10.1371/journal.pone.0227183","title":"Prevalence and characteristics of Livestock-Associated Methicillin-Resistant Staphylococcus aureus (LA-MRSA) isolated from chicken meat in the province of Quebec, Canada","year":2020,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation","keywords":"Multilocus sequence typing; Pulsed-field gel electrophoresis; SCCmec; Methicillin-resistant Staphylococcus aureus; Staphylococcus aureus; Biology; Veterinary medicine; Microbiology; Tetracycline; Antibiotic resistance; Broiler; Flock; Typing; Antibiotics; Genotype; Gene; Medicine; Bacteria; Food science; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002893803,0.0002514657,0.0008494126,0.00005781973,0.0000470049,0.00001737148,0.0003165731,0.0001795549,0.00004253512],"category_scores_gemma":[0.001863654,0.0002014965,0.00006140161,0.0003809335,0.0002894706,0.00006371758,0.00008591788,0.000555975,9.638126e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001316315,"about_ca_system_score_gemma":0.001193628,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.1831365,"about_ca_topic_score_gemma":0.4771738,"domain_scores_codex":[0.997508,0.0003036731,0.0007422908,0.000383394,0.0007643799,0.0002982009],"domain_scores_gemma":[0.9978097,0.0008157964,0.0005131449,0.0003989093,0.0003163189,0.0001461475],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00140058,0.001054306,0.1131463,0.001816784,0.0005348662,0.0001864589,0.002338801,0.0000026594,0.8788779,0.00006880458,0.0004355206,0.000136953],"study_design_scores_gemma":[0.001818469,0.000578094,0.9057629,0.00320315,0.001007059,2.32547e-7,0.0004705176,0.0007680588,0.0858582,0.00004523566,0.0001267049,0.0003613992],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994372,0.0009520817,0.00004945905,0.002588557,0.00001593145,0.001086585,0.0007564143,0.00002438959,0.0001546117],"genre_scores_gemma":[0.9983825,0.0003418599,0.0003948149,0.0005987267,0.00004221709,0.00001634503,0.00004944755,0.00003115703,0.0001429234],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7930197,"threshold_uncertainty_score":0.8223031,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02437799680176941,"score_gpt":0.2287285333154485,"score_spread":0.2043505365136791,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}