{"id":"W3000178972","doi":"10.1007/s10750-019-04175-z","title":"Bacterial endosymbionts of Placobdella (Annelida: Hirudinea: Glossiphoniidae): phylogeny, genetic distance, and vertical transmission","year":2020,"lang":"en","type":"article","venue":"Hydrobiologia","topic":"Leech Biology and Applications","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"Stiftelsen Olle Engkvist Byggmästare; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Monophyly; Zoology; Phylogenetics; Symbiotic bacteria; Lineage (genetic); Alphaproteobacteria; Phylogenetic tree; Evolutionary biology; Bacteria; Ecology; Symbiosis; 16S ribosomal RNA; Genetics; Clade; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005213049,0.000145548,0.0003222225,0.00002135843,0.00006001296,0.000004424317,0.00008716559,0.0002023532,0.0002113192],"category_scores_gemma":[0.00005294198,0.0001059289,0.00006784862,0.0001212575,0.0002718804,0.00001763305,0.00004092298,0.0001515193,0.0000327063],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001346042,"about_ca_system_score_gemma":0.0000428475,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006589825,"about_ca_topic_score_gemma":8.897787e-7,"domain_scores_codex":[0.9991003,0.00004288843,0.0002819633,0.0003206973,0.00005514765,0.0001990646],"domain_scores_gemma":[0.9995326,0.00006265885,0.0000434545,0.0001506166,0.00003410364,0.0001765908],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006640427,0.00009917605,0.01280925,0.00006748503,0.00004653916,0.00001262999,0.0001076745,0.000002891028,0.9814844,0.0001629028,0.0007636995,0.003779319],"study_design_scores_gemma":[0.007325689,0.002284003,0.3733805,0.0001428827,0.0003504638,0.0001658584,0.00006357652,0.002264372,0.5762669,0.0003213632,0.03691786,0.0005165017],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947992,0.0005285238,0.002253236,0.00136315,0.0000607211,0.0003278071,0.00004109624,0.00005396409,0.0005722797],"genre_scores_gemma":[0.9976354,0.0001711543,0.001500061,0.0003958069,0.0001604632,0.00001865448,0.00007304669,0.000009968543,0.00003547374],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4052174,"threshold_uncertainty_score":0.4319657,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01529298194453898,"score_gpt":0.2374458094090001,"score_spread":0.2221528274644611,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}