{"id":"W3000477794","doi":"10.1093/cid/ciaa035","title":"Clinical Impact of Metagenomic Next-Generation Sequencing of Plasma Cell-Free DNA for the Diagnosis of Infectious Diseases: A Multicenter Retrospective Cohort Study","year":2020,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Blood groups and transfusion","field":"Medicine","cited_by":332,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Retrospective cohort study; Medicine; Cohort; Clinical Practice; Cohort study; Metagenomics; DNA sequencing; Internal medicine; Biology; DNA; Physical therapy; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003182402,0.0004922241,0.0005277236,0.0009764587,0.000647855,0.001137941,0.0005648685,0.000504479,0.001086994],"category_scores_gemma":[0.005865333,0.0004443416,0.0006786353,0.0009119213,0.0004680072,0.0006866997,0.0008641977,0.0005475226,0.0002208608],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004646425,"about_ca_system_score_gemma":0.0005643758,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001950447,"about_ca_topic_score_gemma":0.002178531,"domain_scores_codex":[0.997833,0.0006350222,0.0002388691,0.0007459747,0.0003260763,0.0002211229],"domain_scores_gemma":[0.9946167,0.0009322938,0.002353521,0.0008597655,0.0006251853,0.0006124905],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008124681,0.00001255316,0.9991834,0.000005396539,0.00004011551,0.000110682,0.00004747285,0.00001421184,0.0001468689,0.000008082273,0.00004308538,0.0003068346],"study_design_scores_gemma":[0.00001732062,0.0003112381,0.9967493,0.00001634109,0.0001037035,0.001649137,0.0003812242,0.0003343424,0.0001277679,0.00001784371,0.0002833809,0.000008480992],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992796,0.000166439,0.0001198034,0.00001966343,0.000004724195,0.00001634998,0.0002504263,0.000002637286,0.0001402886],"genre_scores_gemma":[0.9994202,0.00006785101,0.0001456471,0.00002585741,0.000008633794,0.00001231107,0.0002915505,0.000003390988,0.0000246668],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003182402,"threshold_uncertainty_score":0.01683033,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08931037648120649,"score_gpt":0.3709220067322309,"score_spread":0.2816116302510244,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}