{"id":"W3000666210","doi":"10.1534/g3.119.400813","title":"Type I-F CRISPR-Cas Distribution and Array Dynamics in <i>Legionella pneumophila</i>","year":2020,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"CRISPR; Legionella pneumophila; Biology; Plasmid; Computational biology; Genetics; DNA; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008420531,0.000252018,0.0002106445,0.00003477852,0.00005977048,0.00003706305,0.000192674,0.0001814253,0.000003755663],"category_scores_gemma":[0.00000992587,0.0002799184,0.00006024981,0.0002252723,0.00006797326,0.000002965442,0.0001478424,0.0001181036,0.0000137464],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003848779,"about_ca_system_score_gemma":0.00005320771,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007854249,"about_ca_topic_score_gemma":0.00007787258,"domain_scores_codex":[0.998704,0.0000291767,0.0002878337,0.0004940949,0.0001304306,0.0003544264],"domain_scores_gemma":[0.9993646,0.000008098938,0.00005544924,0.0003025868,0.00007111143,0.0001981912],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001152641,0.00005731881,0.06029565,0.0001350836,0.00006904334,0.00001774497,0.0003317003,0.01043125,0.7507325,0.0001236697,0.0008884128,0.1768023],"study_design_scores_gemma":[0.001290645,0.0008782667,0.009267972,0.0000204894,0.00007935829,0.00007830717,0.0006597704,0.01403302,0.4483595,0.000149432,0.5240536,0.001129692],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6315876,0.3264858,0.03934039,0.001173998,0.0003900965,0.0003882244,0.0001250005,0.00004233259,0.0004664987],"genre_scores_gemma":[0.9164426,0.08096683,0.001242326,0.0004118288,0.0003624914,0.000009584418,0.0004514956,0.00004260398,0.00007023616],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5231652,"threshold_uncertainty_score":0.9999653,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009753622033832609,"score_gpt":0.2615731311125946,"score_spread":0.251819509078762,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}