{"id":"W3000710932","doi":"10.1093/jac/dkz550","title":"Klebsiella pneumoniae ST307 with OXA-181: threat of a high-risk clone and promiscuous plasmid in a resource-constrained healthcare setting","year":2020,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; University of Pretoria; National Health Laboratory Service; Calgary Laboratory Services","keywords":"Klebsiella pneumoniae; Plasmid; clone (Java method); Microbiology; Biology; Klebsiella; Health care; Medicine; Escherichia coli; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003787545,0.0004375122,0.0003616978,0.0003776307,0.001074137,0.001459545,0.0003729693,0.0007874708,0.001796715],"category_scores_gemma":[0.001159316,0.0002984864,0.0002046737,0.0007079766,0.0007426196,0.0005039852,0.001357383,0.0005283923,0.0002350134],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001421675,"about_ca_system_score_gemma":0.002553098,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03660908,"about_ca_topic_score_gemma":0.04148684,"domain_scores_codex":[0.999458,0.00007523152,0.00003350741,0.0001117386,0.0001007941,0.0002207092],"domain_scores_gemma":[0.9993452,0.00007870055,0.0002497547,0.00001925875,0.00008429513,0.0002226936],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005170596,0.0001418621,0.9580701,0.0002283007,0.00005179768,0.008604119,0.002685009,0.0005092011,0.01836791,0.0001962542,0.0008992877,0.009729119],"study_design_scores_gemma":[0.00002220633,0.0004573877,0.9787751,0.00009709849,0.00003698184,0.005888119,0.01148689,0.0005475154,0.001438398,0.0002717671,0.0009456465,0.00003275176],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994272,0.00007000539,0.0000518715,0.00009913393,0.000002525348,0.000009133642,0.00007166634,0.000001861395,0.0002666768],"genre_scores_gemma":[0.9994965,0.000111713,0.0001273209,0.00005149133,0.000003996178,0.000005174028,0.0000878208,0.000001394465,0.0001144524],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03660908,"threshold_uncertainty_score":0.07279199,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005293676294504287,"score_gpt":0.2136201788671093,"score_spread":0.208326502572605,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}