{"id":"W3000873225","doi":"10.1093/gbe/evaa008","title":"The Genome of the Great Gerbil Reveals Species-Specific Duplication of an MHCII Gene","year":2020,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"McGill University; Universitetet i Oslo; National Science Council; H2020 European Research Council; Centers for Disease Control and Prevention; Norges Forskningsråd; Norwegian Sequencing Centre; National Natural Science Foundation of China","keywords":"Biology; Genome; Genetics; Gene; Yersinia pestis; Virology; Gerbil; Gene duplication; Virulence","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007173722,0.0003485298,0.0001978602,0.000420553,0.0001902638,0.0002826104,0.0001265397,0.0002889961,0.0007569502],"category_scores_gemma":[0.0001607028,0.0001352582,0.0003685724,0.0004187099,0.0001418232,0.0001467118,0.0002954663,0.0003035296,0.0003608767],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001438459,"about_ca_system_score_gemma":0.0001535423,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006883869,"about_ca_topic_score_gemma":0.0009692268,"domain_scores_codex":[0.9999517,0.000003732007,0.000002620641,0.0000278675,0.000007186864,0.000006907941],"domain_scores_gemma":[0.9999245,0.0000108132,0.00002647162,0.00001101612,0.000007948887,0.00001914503],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002179473,0.00001365908,0.005373766,0.000116923,0.00003937672,0.0003702595,0.0001065777,0.000196846,0.9864467,0.00008437516,0.0001315859,0.006902004],"study_design_scores_gemma":[0.00005296552,0.0005643404,0.8599598,0.00008838138,0.0003836163,0.006050711,0.0003818964,0.002798027,0.1035168,0.0006158795,0.02554551,0.00004214488],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9908739,0.001423836,0.00272189,0.00007527409,0.00002071876,0.00001124742,0.004009858,0.0001314137,0.0007318979],"genre_scores_gemma":[0.9688154,0.001281821,0.009685085,0.000116622,0.00001903093,0.00002725709,0.01831467,0.000081225,0.001658932],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007569502,"threshold_uncertainty_score":0.002532244,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01929163709392329,"score_gpt":0.2568680612054129,"score_spread":0.2375764241114896,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}