{"id":"W3001365035","doi":"10.1101/2020.01.22.915942","title":"A universal chromosome identification system for maize and wild <i>Zea</i> species","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Agriculture","funders":"National Science Foundation","keywords":"Biology; Zea mays; Chromosome; Karyotype; Subspecies; Fluorescence in situ hybridization; Cytogenetics; Genetics; Chromosomal inversion; Evolutionary biology; Gene; Zoology; Agronomy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004740972,0.0003839272,0.0003621075,0.001119111,0.0004674695,0.000400622,0.0005221004,0.0003512112,0.003138609],"category_scores_gemma":[0.0005250408,0.0003684372,0.0003058993,0.0004465611,0.0003298576,0.0006806779,0.001064345,0.0003931678,0.002034197],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005544741,"about_ca_system_score_gemma":0.000419103,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009107149,"about_ca_topic_score_gemma":0.001177225,"domain_scores_codex":[0.9996021,0.00002912516,0.00003868265,0.0001957155,0.00007285531,0.0000614939],"domain_scores_gemma":[0.9996372,0.00004126225,0.00008377952,0.0001091212,0.00007394658,0.0000545365],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001378751,0.000009487476,0.0009673437,0.00004313678,0.000006470736,0.00007489128,0.00005291598,0.00008946309,0.9793513,0.00087103,0.0003865217,0.01800954],"study_design_scores_gemma":[0.00004647734,0.0002187064,0.02510735,0.00002875782,0.00004493436,0.001601004,0.00007201394,0.005870128,0.9257627,0.0006847028,0.04051343,0.00004980578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.4677226,0.0009596819,0.5017642,0.000250275,0.0001837995,0.0004728831,0.004616696,0.01832516,0.005704788],"genre_scores_gemma":[0.4657981,0.0003993913,0.5096001,0.0001407703,0.0000406055,0.000661138,0.01282328,0.0009143249,0.009622318],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.003138609,"threshold_uncertainty_score":0.01049966,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01866535672125983,"score_gpt":0.1908261094794117,"score_spread":0.1721607527581519,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}