{"id":"W3001436825","doi":"10.1105/tpc.19.00780","title":"Expression Atlas of <i>Selaginella moellendorffii</i> Provides Insights into the Evolution of Vasculature, Secondary Metabolism, and Roots","year":2020,"lang":"en","type":"article","venue":"The Plant Cell","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Max-Planck-Gesellschaft; Nanyang Technological University","keywords":"Biology; Gene; Subfunctionalization; Selaginella; Transcriptome; Plant evolution; Gene duplication; Genetics; Secondary metabolism; Gene expression; Gene family; Evolutionary biology; Botany; Genome; Biosynthesis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001056727,0.0003197085,0.0002240181,0.001114032,0.0003248193,0.0004665167,0.0001832006,0.0001529867,0.002049239],"category_scores_gemma":[0.0001054803,0.0001500918,0.0003048024,0.001231273,0.00011342,0.0001951524,0.0002750934,0.0002187003,0.001154061],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002690322,"about_ca_system_score_gemma":0.0002016434,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001705938,"about_ca_topic_score_gemma":0.002653265,"domain_scores_codex":[0.9999046,0.000008748741,0.000006303284,0.00003848286,0.00002231982,0.00001948924],"domain_scores_gemma":[0.9999069,0.0000175705,0.00002377883,0.00001863295,0.00001747533,0.00001564289],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007403747,0.000006720272,0.002095605,0.00007916147,0.00001048277,0.00004906045,0.00004342794,0.000152966,0.991474,0.0001248756,0.000431782,0.005457844],"study_design_scores_gemma":[0.00001680138,0.0001265494,0.2059567,0.00003642114,0.000115945,0.0009665465,0.000178915,0.003876603,0.6984405,0.0004415352,0.08979889,0.00004457077],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8382746,0.002693384,0.02533938,0.0001477815,0.00004350088,0.00006497209,0.1211244,0.003164413,0.009147611],"genre_scores_gemma":[0.7423378,0.002347183,0.04588314,0.0001565554,0.00003196227,0.0002180379,0.1946959,0.0008021912,0.01352724],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002049239,"threshold_uncertainty_score":0.006855369,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005841539366805344,"score_gpt":0.1819786144927608,"score_spread":0.1761370751259554,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}