{"id":"W3001585765","doi":"10.1093/gbe/evaa012","title":"Can Green Algal Plastid Genome Size Be Explained by DNA Repair Mechanisms?","year":2020,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"","keywords":"Biology; Plastid; Genome; Indel; Palindrome; Intergenic region; Genetics; Inverted repeat; Noncoding DNA; Chloroplast DNA; Genome evolution; Mitochondrial DNA; Evolutionary biology; Gene; Chloroplast","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001093245,0.0001690411,0.0001645825,0.00001596901,0.0002147753,0.000007070311,0.0001563962,0.0003034064,0.00006425013],"category_scores_gemma":[0.00006218362,0.0001734922,0.00007632168,0.0000674311,0.0001312256,0.000004570785,0.0001952094,0.0001014247,0.00001751288],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002437858,"about_ca_system_score_gemma":0.00004782326,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000962747,"about_ca_topic_score_gemma":0.00003784092,"domain_scores_codex":[0.998955,0.00009203199,0.0001464188,0.0004654274,0.00005132718,0.000289831],"domain_scores_gemma":[0.9995623,0.00001289841,0.000064794,0.0001541508,0.00003782974,0.0001679991],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002277606,0.0000198838,0.004906178,0.00001883972,0.00008762087,0.000003302342,0.0001122395,0.000003487205,0.9927802,0.0007196434,0.001081245,0.00003958268],"study_design_scores_gemma":[0.006772473,0.00966122,0.613713,0.00001656067,0.0003581489,0.0001676323,0.001017953,0.0003493252,0.1113032,0.01016675,0.2436756,0.002798277],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9895328,0.001891942,0.00460822,0.002346853,0.0001257453,0.0002601653,0.0008907575,0.00006161791,0.0002818729],"genre_scores_gemma":[0.9962677,0.0001334758,0.000518811,0.001574471,0.0002510383,0.00001345229,0.0009445449,0.00001085511,0.0002856802],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8814771,"threshold_uncertainty_score":0.7074805,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0083682135790211,"score_gpt":0.1954304095624617,"score_spread":0.1870621959834406,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}