{"id":"W3002172498","doi":"10.1007/s10641-020-00948-x","title":"Quantifying genome-wide cytosine methylation in response to hypoxia in the gills, muscle, and brain of an African cichlid fish","year":2020,"lang":"en","type":"article","venue":"Environmental Biology of Fishes","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University","funders":"","keywords":"Cichlid; Biology; Fish <Actinopterygii>; Hypoxia (environmental); Gill; Genome; DNA methylation; Fishery; Zoology; Genetics; Gene; Gene expression; Oxygen; Chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007827164,0.0001240853,0.0001251141,0.0001862762,0.0002817908,0.0001477855,0.0001640579,0.0002135902,0.000776081],"category_scores_gemma":[0.0001498231,0.000132394,0.00009054939,0.0001518999,0.0002412988,0.0001034436,0.0002350415,0.0002617884,0.00007871888],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002158552,"about_ca_system_score_gemma":0.0002136087,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00962474,"about_ca_topic_score_gemma":0.02209016,"domain_scores_codex":[0.999962,0.000002412404,0.000001561694,0.00001652895,0.000007381526,0.00001018315],"domain_scores_gemma":[0.9999313,0.00001347308,0.0000188725,0.000005002398,0.00001618722,0.00001517129],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003947776,0.00001063839,0.02493589,0.00003336426,0.00002320954,0.00004191962,0.0002277039,0.0001308763,0.9718519,0.0000415124,0.00004007107,0.002268106],"study_design_scores_gemma":[0.00001365664,0.0001848969,0.9139587,0.000005121865,0.00005420936,0.0001711448,0.0004874968,0.0006159631,0.08392217,0.00005272522,0.0005247736,0.000009106118],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995219,0.00005211448,0.0001239505,0.00001162581,0.000001430238,0.000001947405,0.0001005629,0.000002251321,0.0001842974],"genre_scores_gemma":[0.9977224,0.00009070859,0.0006204083,0.00003809253,0.000002153262,0.00001592859,0.0002444845,0.000004139535,0.001261551],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00962474,"threshold_uncertainty_score":0.01913744,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02131454182432456,"score_gpt":0.2541863255129979,"score_spread":0.2328717836886734,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}