{"id":"W3003066279","doi":"10.1186/s40168-020-0789-0","title":"Community recovery dynamics in yellow perch microbiome after gradual and constant metallic perturbations","year":2020,"lang":"en","type":"article","venue":"Microbiome","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Natural Environment Research Council; Sight Research UK","keywords":"Biology; Microbiome; Microbial population biology; Ecology; Cadmium; Bioaccumulation; Perch; Host (biology); Disturbance (geology); Zoology; Bacteria; Fishery","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001534914,0.0001832168,0.0003225875,0.0001922682,0.0002970168,0.0003537816,0.0001660282,0.0003136694,0.0006808225],"category_scores_gemma":[0.0002271124,0.0001039629,0.0002388936,0.0001232289,0.0002410633,0.0002315588,0.0004970505,0.0003250569,0.0001368207],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002915546,"about_ca_system_score_gemma":0.0002546279,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001220823,"about_ca_topic_score_gemma":0.002588365,"domain_scores_codex":[0.9998255,0.00001505824,0.00001134868,0.00006657198,0.00004959928,0.00003196146],"domain_scores_gemma":[0.9998185,0.00001336274,0.00005557889,0.00001541144,0.00006383848,0.00003333721],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002974565,0.00003698932,0.02833317,0.00009413334,0.0000206808,0.0000838557,0.0002085687,0.0001472118,0.9662085,0.00002444738,0.00006765864,0.004477175],"study_design_scores_gemma":[0.00001515874,0.001669823,0.7963284,0.00002767668,0.00005818577,0.0002941876,0.001210146,0.001427995,0.1953139,0.0001560959,0.003466832,0.00003156664],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990535,0.0001572439,0.0003082844,0.00002326863,0.000005471153,0.000009100713,0.0002157574,0.000008774067,0.0002185793],"genre_scores_gemma":[0.9976743,0.000134879,0.0005890214,0.00006608514,0.000004207176,0.00003761502,0.0004916175,0.000006565067,0.0009958115],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001220823,"threshold_uncertainty_score":0.002427459,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01623342185660621,"score_gpt":0.2400796211184863,"score_spread":0.2238461992618801,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}