{"id":"W3003066279","doi":"10.1186/s40168-020-0789-0","title":"Community recovery dynamics in yellow perch microbiome after gradual and constant metallic perturbations","year":2020,"lang":"en","type":"article","venue":"Microbiome","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Natural Environment Research Council; Sight Research UK","keywords":"Biology; Microbiome; Microbial population biology; Ecology; Cadmium; Bioaccumulation; Perch; Host (biology); Disturbance (geology); Zoology; Bacteria; Fishery","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002210453,0.0002359539,0.0002691968,0.0001096121,0.0001468032,0.00005354456,0.0002127616,0.0002179637,0.00004634605],"category_scores_gemma":[0.00003437384,0.000241442,0.00009322598,0.0002787052,0.0002381329,0.000009823559,0.0002602345,0.0003409951,0.00003389594],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009292603,"about_ca_system_score_gemma":0.000115685,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001945255,"about_ca_topic_score_gemma":0.001309681,"domain_scores_codex":[0.9986811,0.00021457,0.0003204528,0.0003722844,0.00004438169,0.0003671567],"domain_scores_gemma":[0.9993997,0.00001983456,0.0000651425,0.0003103972,0.00005444893,0.0001505058],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001174262,0.000107304,0.001736749,0.00009600548,0.00004017429,0.000008547378,0.0005492209,0.000001079935,0.9951281,0.00004227063,0.001809491,0.0003636229],"study_design_scores_gemma":[0.01595424,0.005940798,0.1107417,0.0005766995,0.0004763897,0.001727143,0.01289057,0.0009229414,0.3993188,0.0008317577,0.4442875,0.006331377],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948829,0.001226739,0.0001729507,0.002585654,0.00008790877,0.0002766589,0.0004839172,0.00001908637,0.0002642297],"genre_scores_gemma":[0.9941463,0.0003808059,0.0009282581,0.002931557,0.00005454371,0.00001561374,0.0009635175,0.00003397808,0.0005454418],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5958093,"threshold_uncertainty_score":0.9845718,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01623342185660621,"score_gpt":0.2400796211184863,"score_spread":0.2238461992618801,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}