{"id":"W3003834657","doi":"10.1261/rna.073965.119","title":"A single unidirectional piRNA cluster similar to the <i>flamenco</i> locus is the major source of EVE-derived transcription and small RNAs in <i>Aedes aegypti</i> mosquitoes","year":2020,"lang":"en","type":"article","venue":"RNA","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Agence Nationale de la Recherche","keywords":"Biology; Piwi-interacting RNA; Genome; Genetics; Small RNA; Transposable element; Aedes aegypti; Antisense RNA; Drosophila melanogaster; Small nucleolar RNA; Transcription (linguistics); Locus (genetics); RNA; Long non-coding RNA; Computational biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001225819,0.00009759103,0.0001123475,0.000005889858,0.0001681643,0.00004552398,0.0001778505,0.00004512656,0.0001015079],"category_scores_gemma":[0.00003275011,0.00003178508,0.00006022344,0.0003001072,0.00005563383,0.00003763109,0.00005375232,0.00008249595,0.000008681998],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001105018,"about_ca_system_score_gemma":0.000007480104,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003368548,"about_ca_topic_score_gemma":0.002227659,"domain_scores_codex":[0.9992554,0.00008323142,0.0001802412,0.0001941942,0.0001431066,0.000143853],"domain_scores_gemma":[0.9996637,0.0001392431,0.00005057167,0.00004538907,0.00003733148,0.00006372592],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004296491,0.00004686846,0.0006913664,0.000005909064,0.0000122502,4.112081e-7,0.00217288,0.0001490075,0.9784932,0.00003831455,0.0007403078,0.01760653],"study_design_scores_gemma":[0.001010424,0.001289868,0.1464689,0.000120215,0.0001311644,0.00002413377,0.004324848,0.003123337,0.392544,0.002103467,0.4482573,0.0006023242],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9074076,0.0002585642,0.0000443931,0.09161839,0.00004545619,0.0002282298,0.00002645006,0.00001735575,0.0003534922],"genre_scores_gemma":[0.9930574,0.00003661332,0.00007749847,0.006450958,0.0002147807,0.00001673406,0.000005667235,0.000001208052,0.000139143],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5859492,"threshold_uncertainty_score":0.1296158,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02538541161392592,"score_gpt":0.1949444403556529,"score_spread":0.169559028741727,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}