{"id":"W3004204579","doi":"10.1186/s12864-019-6415-5","title":"A comprehensive epigenomic analysis of phenotypically distinguishable, genetically identical female and male Daphnia pulex","year":2020,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"University of Birmingham; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; International Seafood Sustainability Foundation; Wellcome Trust","keywords":"Daphnia pulex; Biology; Daphnia; Epigenetics; DNA methylation; H3K4me3; Genetics; Epigenomics; Histone; Gene expression; Regulation of gene expression; Gene; Methylation; Promoter; Zoology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001147147,0.0002301181,0.0002741573,0.0006843177,0.0002391696,0.000328161,0.0001355204,0.0002233186,0.000668724],"category_scores_gemma":[0.0001591638,0.0001231275,0.0002933205,0.000593457,0.0001585992,0.000126005,0.0003673853,0.0002249646,0.0002633744],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000166442,"about_ca_system_score_gemma":0.0001522342,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001206839,"about_ca_topic_score_gemma":0.002363522,"domain_scores_codex":[0.9998567,0.000006674332,0.000007030486,0.00007968176,0.0000306185,0.00001927813],"domain_scores_gemma":[0.9998312,0.0000249825,0.00005277117,0.00002687367,0.00004160533,0.00002251112],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001077201,0.00001016191,0.01162049,0.00008414569,0.00004596819,0.00006105247,0.0000622749,0.00006018922,0.9831721,0.00002580255,0.0001021467,0.00464807],"study_design_scores_gemma":[0.00000844362,0.0001546467,0.8907587,0.00001265033,0.0001741929,0.0005095766,0.0001384283,0.0004675485,0.1021245,0.00007359703,0.005563608,0.00001398206],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9713448,0.001444293,0.005108761,0.00004022233,0.00001537855,0.00003679937,0.02065546,0.0001266093,0.001227625],"genre_scores_gemma":[0.9572335,0.0009641473,0.008074073,0.0001910933,0.00001461605,0.0001259494,0.0307173,0.00008477383,0.00259459],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001206839,"threshold_uncertainty_score":0.002399564,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02929508896337998,"score_gpt":0.2659807394020512,"score_spread":0.2366856504386712,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}