{"id":"W3004785320","doi":"10.1186/s12864-019-6431-5","title":"Topology and expressed repertoire of the Felis catus T cell receptor loci","year":2020,"lang":"en","type":"article","venue":"BMC Genomics","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Chulalongkorn University; Agence Nationale de la Recherche","keywords":"Biology; Felis catus; Repertoire; Genetics; Evolutionary biology; Computational biology; Topology (electrical circuits); Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000769914,0.0001563288,0.0001866736,0.0008891856,0.0002213231,0.0004345369,0.0001565345,0.0002474333,0.001666004],"category_scores_gemma":[0.0001581176,0.0001095503,0.0001996503,0.0004990686,0.0001378404,0.0001837979,0.0001712659,0.0001960648,0.0005644786],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002356341,"about_ca_system_score_gemma":0.000115108,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001069188,"about_ca_topic_score_gemma":0.001337299,"domain_scores_codex":[0.9999187,0.000005261785,0.000004943905,0.00003565656,0.00001658109,0.00001893752],"domain_scores_gemma":[0.9998561,0.00003047365,0.00004175332,0.00001222602,0.00003197701,0.00002752038],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003946662,0.00002313291,0.04015966,0.0001578013,0.00003015467,0.0004219537,0.0002650959,0.0004975015,0.9475717,0.0002721748,0.0001797293,0.01002644],"study_design_scores_gemma":[0.00002547521,0.0003881541,0.8248343,0.00006455584,0.0001522953,0.004767207,0.0006965365,0.007648655,0.145782,0.0005894146,0.01500707,0.00004426483],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975842,0.000397397,0.0005222373,0.00001634897,0.000001730093,0.000004067928,0.0007518818,0.00002314318,0.0006989183],"genre_scores_gemma":[0.9932417,0.0002791018,0.001549802,0.00002667116,0.000004980013,0.00001904452,0.003561917,0.0000129586,0.001303876],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001666004,"threshold_uncertainty_score":0.005573332,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01572083719590083,"score_gpt":0.1984401513842148,"score_spread":0.1827193141883139,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}