{"id":"W3004901913","doi":"10.1371/journal.pbio.3000597","title":"Selective sweeps on novel and introgressed variation shape mimicry loci in a butterfly adaptive radiation","year":2020,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":87,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"FP7 Ideas: European Research Council; Science and Technology Facilities Council; Exploratory Research for Advanced Technology; Natural Environment Research Council; Engineering and Physical Sciences Research Council; Medical Research Council; Directorate for Biological Sciences; Dell EMC; Universidad del Rosario; Isaac Newton Trust; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Biotechnology and Biological Sciences Research Council; Austrian Science Fund; CHIST-ERA; Agence Nationale de la Recherche; National Science Foundation; University of Cambridge; Sight Research UK; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)","keywords":"Biology; Mimicry; Butterfly; Evolutionary biology; Genetics; Adaptation (eye); Variation (astronomy); Genetic variation; Adaptive radiation; Computational biology; Zoology; Gene; Phylogenetics; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004172398,0.0001528358,0.0002067869,0.0003768261,0.000217582,0.0004140082,0.0001956827,0.0003116229,0.0009483484],"category_scores_gemma":[0.001033044,0.0001195525,0.0002659624,0.000333045,0.0005869612,0.000240337,0.0003424043,0.0002790438,0.0000786464],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003234569,"about_ca_system_score_gemma":0.0001270241,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001127421,"about_ca_topic_score_gemma":0.002512162,"domain_scores_codex":[0.9998822,0.00003986362,0.000006219256,0.0000372101,0.00001590396,0.00001863946],"domain_scores_gemma":[0.99967,0.0001493513,0.00006725908,0.00003677871,0.00001852985,0.00005815706],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001175342,0.0001786347,0.5273128,0.000147862,0.0006578406,0.0008453444,0.001359541,0.06368002,0.3695568,0.003832051,0.0003725572,0.03088119],"study_design_scores_gemma":[0.00009294313,0.000309973,0.8982228,0.00001362508,0.0001176665,0.0004717422,0.0004581588,0.0902632,0.006791748,0.002794699,0.0004229711,0.00004043798],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995686,0.00001402095,0.0002622267,0.000007850474,4.208137e-7,0.000001031295,0.00001187159,0.000007777623,0.0001261946],"genre_scores_gemma":[0.9996772,0.00001447324,0.0002197142,0.000007801839,0.000001000793,0.000001843444,0.00003248591,0.000003512817,0.0000420449],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001127421,"threshold_uncertainty_score":0.003172517,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02050987254051286,"score_gpt":0.2257340295808366,"score_spread":0.2052241570403237,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}