{"id":"W3005528192","doi":"10.1128/mbio.03256-19","title":"The HopQ-CEACAM Interaction Controls CagA Translocation, Phosphorylation, and Phagocytosis of <i>Helicobacter pylori</i> in Neutrophils","year":2020,"lang":"en","type":"article","venue":"mBio","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; McGill University Health Centre","funders":"Deutsche Forschungsgemeinschaft","keywords":"CagA; Helicobacter pylori; Phagocytosis; Secretion; Microbiology; Chromosomal translocation; Phagosome; Biology; Phosphorylation; Immunology; Cell biology; Virulence; Gene; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001874707,0.0001718112,0.000378214,0.0000643225,0.00008899609,0.00001830533,0.00008475081,0.00009820821,0.00001697583],"category_scores_gemma":[0.0001685359,0.0001295036,0.00006413759,0.0002620689,0.0001796557,0.0001326976,0.00003091481,0.0003218316,0.00001524312],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005364141,"about_ca_system_score_gemma":0.00003544043,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008277238,"about_ca_topic_score_gemma":0.0001088365,"domain_scores_codex":[0.9987025,0.00008370419,0.0005315749,0.0002743424,0.0001572474,0.0002506415],"domain_scores_gemma":[0.999227,0.0001386369,0.0001503792,0.0001881983,0.0001849892,0.0001107982],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003886973,0.0002641068,0.832037,0.0001260785,0.0007736487,0.00002511783,0.008201708,0.00003573617,0.1246627,0.0001681369,0.002963513,0.02685528],"study_design_scores_gemma":[0.01016893,0.001423852,0.9209917,0.0001949941,0.0003397377,0.00005452926,0.001324369,0.000769579,0.03798154,0.00005914649,0.0264478,0.0002438922],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9563698,0.001126903,0.0001742791,0.04139559,0.0001784455,0.0005004089,0.00001217628,0.00004077264,0.0002016734],"genre_scores_gemma":[0.9956868,0.001005607,0.00005888173,0.003005325,0.0001207012,0.00004978694,0.00001596244,0.00001952209,0.00003738103],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08895465,"threshold_uncertainty_score":0.5281004,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01892139907638958,"score_gpt":0.2522163237175484,"score_spread":0.2332949246411588,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}