{"id":"W3006085452","doi":"10.1038/s41598-020-59260-4","title":"DNA methylation landscape of triple-negative ductal carcinoma in situ (DCIS) progressing to the invasive stage in canine breast cancer","year":2020,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"British Columbia Knowledge Development Fund; University of British Columbia","keywords":"Ductal carcinoma; Breast cancer; DNA methylation; Cancer research; Cancer; Methylation; Biology; Triple-negative breast cancer; Carcinoma in situ; Pathology; Oncology; Medicine; Gene; Gene expression; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007856343,0.00007889458,0.0001314458,0.0002882286,0.000100272,0.000156158,0.00008735785,0.0001387471,0.0006015647],"category_scores_gemma":[0.00008794938,0.0001036813,0.00009470253,0.0001616628,0.0001483146,0.0001007991,0.0001308156,0.0001867569,0.0001099472],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002013765,"about_ca_system_score_gemma":0.00009240915,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001340207,"about_ca_topic_score_gemma":0.002055362,"domain_scores_codex":[0.999947,0.000006204149,0.00000238725,0.00001860873,0.00001497126,0.00001078807],"domain_scores_gemma":[0.999947,0.000006739057,0.00001894534,0.000004308622,0.00001020108,0.00001283354],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001828938,0.00001955329,0.00508651,0.00002298117,0.000006620717,0.0000492166,0.00007732992,0.00009086422,0.9924569,0.00008714824,0.0000439156,0.001876026],"study_design_scores_gemma":[0.00002227878,0.0008923137,0.3822537,0.00001089591,0.00008059569,0.001919309,0.0005241529,0.003984593,0.6008043,0.0003709945,0.009107739,0.00002912718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973175,0.00076685,0.0008597941,0.00003068322,0.000004334243,0.00001016637,0.0002765511,0.00002330906,0.0007108386],"genre_scores_gemma":[0.9974514,0.0003864382,0.0007087096,0.00002701771,0.000002222101,0.00001295512,0.0004499897,0.000006777824,0.0009544815],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001340207,"threshold_uncertainty_score":0.002664804,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01829014177853466,"score_gpt":0.2753082742237143,"score_spread":0.2570181324451796,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}