{"id":"W3006182044","doi":"10.3389/fvets.2020.00027","title":"Campylobacter jejuni Strain Dynamics in a Raccoon (Procyon lotor) Population in Southern Ontario, Canada: High Prevalence and Rapid Subtype Turnover","year":2020,"lang":"en","type":"article","venue":"Frontiers in Veterinary Science","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; University of Guelph; Canadian Food Inspection Agency","funders":"Public Health Agency of Canada","keywords":"Campylobacter jejuni; Campylobacteriosis; Campylobacter; Raccoon Dogs; Biology; Veterinary medicine; Feces; Carriage; Population; Campylobacter coli; Wildlife; Campylobacter fetus; Manure; Disease reservoir; Microbiology; Zoology; Ecology; Bacteria; Virology; Medicine; Environmental health","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005700656,0.0001847853,0.0003026244,0.00006593796,0.00007647964,0.00004220244,0.0004305047,0.0001057964,0.0001432136],"category_scores_gemma":[0.0001317173,0.000101925,0.00002356914,0.0009415838,0.0001806369,0.0003433356,0.0001452355,0.000265902,0.000001553833],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000871674,"about_ca_system_score_gemma":0.0001586909,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7307737,"about_ca_topic_score_gemma":0.9247668,"domain_scores_codex":[0.9981067,0.0001585885,0.0003663033,0.0006328457,0.000240519,0.0004950364],"domain_scores_gemma":[0.9995642,0.0000703182,0.0001138227,0.0000790339,0.00002334548,0.0001492822],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001593753,0.00003093061,0.9844875,0.00001625484,0.000001291227,0.00005345097,0.0005920852,0.00004771704,0.004473161,0.00002998095,0.00004631194,0.01006197],"study_design_scores_gemma":[0.0002280772,0.0004362601,0.9945971,0.000038833,0.000001975374,0.0000124191,0.0009212911,0.0029226,0.000004468468,0.0002253821,0.0004022146,0.0002093263],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981259,0.0001730991,0.00000860814,0.0008794562,0.000368078,0.0002802146,0.00006371131,0.00001483116,0.0000861333],"genre_scores_gemma":[0.9990247,0.00002991536,0.0003202868,0.0004523217,0.00004255741,0.000009997369,0.00004051535,0.000001511468,0.00007818939],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.193993,"threshold_uncertainty_score":0.415638,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01753243551209722,"score_gpt":0.2034753903481937,"score_spread":0.1859429548360965,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}