{"id":"W3006446182","doi":"10.1038/s41598-020-59772-z","title":"Molecular characterization of Extended-spectrum β lactamase- producing E. coli recovered from community-acquired urinary tract infections in Upper Egypt","year":2020,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":95,"is_retracted":false,"has_abstract":true,"ca_institutions":"Red Deer Polytechnic","funders":"","keywords":"Escherichia coli; Microbiology; Meropenem; Biology; Polymerase chain reaction; Urinary system; Urine; 16S ribosomal RNA; Antimicrobial; Beta-lactamase; Phylogenetic tree; Antibiotics; Gene; Antibiotic resistance; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001438507,0.0002696439,0.0002929812,0.0008301059,0.0001772151,0.0005621912,0.0002173129,0.0003779058,0.0007912141],"category_scores_gemma":[0.0006237434,0.0001640329,0.0002917259,0.0008470106,0.0001644314,0.0002346084,0.0002223086,0.0002165953,0.0002272261],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001662831,"about_ca_system_score_gemma":0.0002170072,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002866425,"about_ca_topic_score_gemma":0.002515284,"domain_scores_codex":[0.9998177,0.00001812764,0.00003601798,0.00004003687,0.00004846171,0.00003970625],"domain_scores_gemma":[0.9997376,0.00004436375,0.00008737412,0.00001609859,0.00008035176,0.00003424616],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006675593,0.0003763141,0.4687206,0.0004099754,0.00007913734,0.002541391,0.001371736,0.0003021108,0.5042534,0.00008738645,0.0002365163,0.02095384],"study_design_scores_gemma":[0.00002095473,0.000671,0.9482824,0.00006131727,0.00007854191,0.004311494,0.00205282,0.0004944956,0.04149435,0.00003406827,0.002483134,0.00001553459],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998757,0.0003409826,0.0001840502,0.00003353367,0.000004134318,0.00001851885,0.0003595274,0.000003587805,0.0002985786],"genre_scores_gemma":[0.9962599,0.0006665905,0.0008421376,0.00007156722,0.00001082111,0.0000159992,0.001187552,0.000004292195,0.0009411919],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002866425,"threshold_uncertainty_score":0.005699515,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01372660682743995,"score_gpt":0.241986268090076,"score_spread":0.228259661262636,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}