{"id":"W3006660406","doi":"10.1080/15592294.2020.1722922","title":"Developmental genome-wide DNA methylation asymmetry between mouse placenta and embryo","year":2020,"lang":"en","type":"article","venue":"Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University and Génome Québec Innovation Centre; Ontario Genomics; McGill University Health Centre; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; DNA methylation; Placenta; Genome; Embryo; Genetics; DNA; Methylation; Computational biology; Evolutionary biology; Cell biology; Gene; Pregnancy; Fetus; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001943742,0.0002230321,0.0001992981,0.00004714305,0.0001247187,0.00004946951,0.0001674335,0.0002044411,0.00002551139],"category_scores_gemma":[0.0002068119,0.0002426263,0.00005952058,0.0001362758,0.00006737228,0.000005227523,0.0002081721,0.0001144718,0.0000289116],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002243063,"about_ca_system_score_gemma":0.00007245721,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000059743,"about_ca_topic_score_gemma":0.00001095091,"domain_scores_codex":[0.9986169,0.00008716001,0.0003419683,0.0004748538,0.0002006113,0.0002785483],"domain_scores_gemma":[0.9993584,0.00003983157,0.0001126045,0.0001588203,0.00006724994,0.0002630508],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002863721,0.00001923244,0.1179587,0.00002467838,0.00007199803,0.000001454247,0.0002168222,0.000138444,0.8747953,0.00001234944,0.0001656446,0.00656667],"study_design_scores_gemma":[0.0004910281,0.0002427934,0.1754,0.000003187638,0.00003408669,6.687061e-7,0.0001045766,0.00007740359,0.784102,0.00007779799,0.03914899,0.0003174999],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9786502,0.002742103,0.0168247,0.0003909506,0.00005135077,0.0002409447,0.00005245048,0.00002443691,0.001022872],"genre_scores_gemma":[0.9886284,0.001139702,0.008663339,0.0004603592,0.0003927347,0.000008232246,0.0003893035,0.00004763586,0.0002703054],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09069332,"threshold_uncertainty_score":0.9894015,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02130794977359417,"score_gpt":0.2444367398191794,"score_spread":0.2231287900455852,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}