{"id":"W3007226290","doi":"10.1074/mcp.ra119.001841","title":"Proteomic Analysis of Salmonella-modified Membranes Reveals Adaptations to Macrophage Hosts","year":2020,"lang":"en","type":"article","venue":"Molecular & Cellular Proteomics","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Regina","funders":"Deutsche Forschungsgemeinschaft; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Salmonella enterica; Cell biology; Salmonella; Biology; Intracellular; Biogenesis; Compartment (ship); Intracellular parasite; Proteome; Macrophage; Cellular compartment; Cell; Bacteria; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001580474,0.000280623,0.0001392268,0.0001943432,0.0001967949,0.0003240881,0.0001962326,0.0003642961,0.0008887427],"category_scores_gemma":[0.0002084015,0.0001737431,0.0002237007,0.0001685756,0.0001924733,0.0002875326,0.0002531407,0.0003704859,0.0004850192],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001938973,"about_ca_system_score_gemma":0.0001466546,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008596936,"about_ca_topic_score_gemma":0.001351081,"domain_scores_codex":[0.9999322,0.00001162414,0.000003437625,0.00001614644,0.00001409561,0.00002253514],"domain_scores_gemma":[0.9999117,0.00001579891,0.00001847133,0.00000876706,0.00002559174,0.00001970618],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000978149,0.000006107407,0.0004344763,0.00002094443,0.000005107403,0.00003127786,0.00001303061,0.00001209806,0.9989771,0.00003330503,0.00002111868,0.0003477285],"study_design_scores_gemma":[0.0000122686,0.0002928284,0.07990359,0.00002567004,0.00004354577,0.0009716505,0.0004173701,0.001487694,0.9135254,0.000246898,0.003055545,0.00001746269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955069,0.001074648,0.001792648,0.0001488805,0.00002468022,0.000009462016,0.0004540759,0.00002199444,0.0009667673],"genre_scores_gemma":[0.9940264,0.0008412478,0.002198635,0.00009185896,0.000007911977,0.000009996822,0.001083125,0.00001534622,0.001725436],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008887427,"threshold_uncertainty_score":0.002973139,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02721730248003478,"score_gpt":0.23483526186495,"score_spread":0.2076179593849152,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}