{"id":"W3007312897","doi":"10.1111/mmi.14496","title":"Species‐specific secretion of ESX‐5 type VII substrates is determined by the linker 2 of EccC <sub>5</sub>","year":2020,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Biology; Mycobacterium marinum; Secretion; Virulence; Linker; Microbiology; Mycobacterium tuberculosis; Biochemistry; Genetics; Mycobacterium; Tuberculosis; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002480972,0.0001730591,0.0005383662,0.0000624637,0.00003302277,0.000003824254,0.0002090912,0.0002517553,0.0002919362],"category_scores_gemma":[0.0003423308,0.0001215419,0.0001817355,0.0002814855,0.0004490137,0.00001711882,0.00008990218,0.0003050954,0.00008992144],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002472261,"about_ca_system_score_gemma":0.000066563,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001725815,"about_ca_topic_score_gemma":0.000003593847,"domain_scores_codex":[0.9984694,0.0002874183,0.0004651405,0.000337632,0.00007685378,0.0003636273],"domain_scores_gemma":[0.9989973,0.0001714978,0.0001561845,0.0003456665,0.0002055025,0.0001239045],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003711504,0.00005186597,0.001835911,0.00006018385,0.0001346064,0.00002383735,0.0001608088,0.000003508215,0.9638386,0.00008911915,0.03270893,0.0007214622],"study_design_scores_gemma":[0.0005781855,0.0008541587,0.00285222,0.00002424087,0.00004538618,0.00007981284,0.00005254928,0.00006781858,0.9675472,0.00003388521,0.0277682,0.00009639514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9862901,0.002764553,0.0003842737,0.009600052,0.00007370107,0.0003219968,0.00009046469,0.00001851712,0.0004563319],"genre_scores_gemma":[0.9947158,0.0006872105,0.0001398744,0.004033017,0.00006965185,0.000006712581,0.0002828046,0.00002216647,0.00004279081],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008425661,"threshold_uncertainty_score":0.4956336,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02443224945209767,"score_gpt":0.2663545023798006,"score_spread":0.2419222529277029,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}