{"id":"W3007520403","doi":"10.3390/microorganisms8020275","title":"Arginine Catabolic Mobile Element in Evolution and Pathogenicity of the Community-Associated Methicillin-Resistant Staphylococcus aureus Strain USA300","year":2020,"lang":"en","type":"article","venue":"Microorganisms","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Health Services; University of Calgary","funders":"Banting Research Foundation; Technische Universität Kaiserslautern; Alberta Health Services","keywords":"Virulence; Biology; Microbiology; Staphylococcus aureus; Pathogenicity island; Virulence factor; Genetics; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008628453,0.0002975314,0.0006514895,0.00009889123,0.0002222905,0.00002119456,0.0003632458,0.0002145432,0.00007434531],"category_scores_gemma":[0.0005168451,0.0002405178,0.0001424151,0.000868156,0.0003860028,0.0000583395,0.0002791456,0.00100823,0.000007247716],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003218051,"about_ca_system_score_gemma":0.0003278921,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008888954,"about_ca_topic_score_gemma":0.001533126,"domain_scores_codex":[0.9975635,0.0005336279,0.000729716,0.0003452425,0.0003795131,0.000448368],"domain_scores_gemma":[0.9985598,0.0001712705,0.0003385844,0.0005538962,0.0002034523,0.0001729977],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002248143,0.0003390121,0.01740774,0.0001619888,0.00007405383,0.00001327103,0.00361078,0.00003819855,0.9773045,0.000211999,0.0002780983,0.0003355651],"study_design_scores_gemma":[0.003747202,0.0007036002,0.3586393,0.0003102074,0.0002071151,0.000002591193,0.004112219,0.000124134,0.6294068,0.0003054347,0.002068623,0.0003727931],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949591,0.001086783,0.0004071777,0.001337836,0.0000647342,0.001224435,0.0007767506,0.00005293085,0.00009026602],"genre_scores_gemma":[0.9978909,0.00008044749,0.0006891985,0.001109118,0.00004264495,0.0000270063,0.00006327098,0.00004652299,0.0000508807],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3478977,"threshold_uncertainty_score":0.9808029,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01969938873977389,"score_gpt":0.2599237701455854,"score_spread":0.2402243814058115,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}