{"id":"W3009328067","doi":"10.1094/mpmi-11-19-0310-r","title":"Transcriptomic and Exometabolomic Profiling Reveals Antagonistic and Defensive Modes of<i>Clonostachys rosea</i>Action Against<i>Fusarium graminearum</i>","year":2020,"lang":"en","type":"article","venue":"Molecular Plant-Microbe Interactions","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa; Queen's University; Agriculture and Agri-Food Canada; National Research Council Canada","funders":"U.S. Department of Agriculture; Office of Science; National Research Council Canada; Sveriges Lantbruksuniversitet; Agriculture and Agri-Food Canada; Joint Genome Institute; U.S. Department of Energy","keywords":"Fusarium; Biology; Transcriptome; Botany; Genetics; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00005896379,0.0002475765,0.0002886692,0.00007644729,0.0001179746,0.00005275349,0.00009927804,0.0001075227,0.000001371646],"category_scores_gemma":[0.00009775801,0.0002569293,0.0001179089,0.00009379713,0.00008797992,0.00001952367,0.0000781235,0.0001710171,0.000002886302],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001062,"about_ca_system_score_gemma":0.00004863387,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001573426,"about_ca_topic_score_gemma":0.000004131314,"domain_scores_codex":[0.9987759,0.000091337,0.0003144222,0.0004789033,0.00009124824,0.0002481867],"domain_scores_gemma":[0.9993859,0.00003002734,0.0001357178,0.0001784231,0.00008801735,0.0001818966],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00025804,0.00005738565,0.001762408,0.000118378,0.0001302118,0.00004028087,0.00007149092,0.0001343996,0.9969599,0.00008718914,0.00009296347,0.0002874047],"study_design_scores_gemma":[0.0004777459,0.0001543475,0.0009542547,0.00001797213,0.0001539444,0.0001979687,0.0001933766,0.00123612,0.9947777,0.00002172723,0.00154636,0.0002684362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9824499,0.002260978,0.005519066,0.0001668037,0.0001186898,0.0003093692,0.009047286,0.00002659436,0.0001012715],"genre_scores_gemma":[0.9926326,0.001126198,0.001138388,0.0008467035,0.00007198241,0.00001863802,0.004106565,0.00003280845,0.0000260865],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01018269,"threshold_uncertainty_score":0.9999883,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01858076077393645,"score_gpt":0.2413363550523049,"score_spread":0.2227555942783684,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}