{"id":"W3009689852","doi":"10.1128/mra.00109-20","title":"Complete Genome Sequence of the Highly Pathogenic Strain A/Domestic Goose/Pavlodar/1/05 (H5N1) of the Avian Influenza Virus, Isolated in Kazakhstan in 2005","year":2020,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Biological Sciences","funders":"Ministry of Education and Science of the Republic of Kazakhstan","keywords":"Goose; Influenza A virus subtype H5N1; Strain (injury); Virology; Whole genome sequencing; Clade; Highly pathogenic; Biology; Avian influenza virus; Virus; Genome; Virus strain; Gene; Genetics; Phylogenetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001859869,0.0007130067,0.0006424243,0.001188045,0.0007400936,0.0005228237,0.0004331789,0.0004892209,0.003154595],"category_scores_gemma":[0.0004029094,0.0002135766,0.0005234543,0.002238166,0.0002256772,0.0003550407,0.0003199717,0.000802712,0.002497558],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005650222,"about_ca_system_score_gemma":0.001352192,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01367653,"about_ca_topic_score_gemma":0.01730612,"domain_scores_codex":[0.9998291,0.00001593777,0.00002205349,0.00004806207,0.00004655502,0.00003827707],"domain_scores_gemma":[0.9997063,0.00004670752,0.00007991595,0.00002561725,0.00008776214,0.00005365134],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002690868,0.0003227644,0.01743868,0.002344812,0.0002068819,0.001977305,0.001065907,0.001348778,0.9004913,0.0007313199,0.02255435,0.04882705],"study_design_scores_gemma":[0.0002445564,0.001233434,0.5615557,0.0003479601,0.0008872941,0.003857654,0.001821604,0.001727125,0.08314107,0.000653813,0.3443379,0.0001919146],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"dataset","genre_scores_codex":[0.5237831,0.009595979,0.008545746,0.0007170205,0.0008163831,0.0002996985,0.4464189,0.0005897066,0.009233457],"genre_scores_gemma":[0.1888993,0.003172007,0.01621306,0.0003390775,0.0001436661,0.000108213,0.7863173,0.0001294341,0.004677904],"genre_candidate":"dataset","genre_consensus":null,"teacher_disagreement_score":0.01367653,"threshold_uncertainty_score":0.02719384,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0734403286861405,"score_gpt":0.3249122990300054,"score_spread":0.2514719703438649,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}