{"id":"W3009711640","doi":"","title":"Molecular characterization of <i>Mycobacterium avium</i> subspecies <i>paratuberculosis</i> C-type and S-type isolated from sheep and goats by using a combination of MIRU-VNTR loci.","year":2019,"lang":"en","type":"article","venue":"PubMed","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Canadian Food Inspection Agency","funders":"","keywords":"Mycobacterium avium subspecies paratuberculosis; Biology; Paratuberculosis; Subspecies; Genotype; Herd; Genetic diversity; Mycobacterium avium subsp. paratuberculosis; Mycobacterium; Genetics; Zoology; Gene; Bacteria; Population","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001735281,0.0002461948,0.0001636047,0.0007129941,0.0003575495,0.0002909478,0.0002534382,0.0002584764,0.0005967768],"category_scores_gemma":[0.000501407,0.00009195837,0.0001212468,0.0004369896,0.0002316475,0.0000753672,0.0001165902,0.0001859676,0.0002253882],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005549327,"about_ca_system_score_gemma":0.0006331167,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.121471,"about_ca_topic_score_gemma":0.2093387,"domain_scores_codex":[0.9998046,0.00001745627,0.00001423164,0.00004910761,0.00005870455,0.0000559155],"domain_scores_gemma":[0.9996326,0.00004670996,0.00008589702,0.00002137999,0.0001341761,0.00007915319],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002959846,0.0001059646,0.2774705,0.00009034434,0.00004551133,0.0004026067,0.0006206863,0.0001108736,0.7118978,0.0000494931,0.0002095671,0.008700702],"study_design_scores_gemma":[0.000008149136,0.0002830567,0.9788581,0.00001517122,0.00003260603,0.000968776,0.0005721335,0.0002945778,0.01729821,0.00001100429,0.001652406,0.000005910676],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985999,0.0001850153,0.000283988,0.00002550879,0.000003328116,0.00002049909,0.0004198308,0.000004494528,0.0004575059],"genre_scores_gemma":[0.9962319,0.0001615983,0.00134128,0.00004814026,0.000004574321,0.00001233918,0.00165,0.000005289663,0.0005448006],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.121471,"threshold_uncertainty_score":0.241528,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01298905791157744,"score_gpt":0.2290523500305427,"score_spread":0.2160632921189653,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}