{"id":"W3009795769","doi":"10.3138/jammi.2019-0015","title":"Emergence of a clone of invasive <i>fucK</i>-negative serotype e <i>Haemophilus influenzae</i> in British Columbia","year":2020,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Mental Health & Substance Use Services; Public Health Agency of Canada","funders":"","keywords":"Haemophilus influenzae; Serotype; Microbiology; Pulsed-field gel electrophoresis; Operon; Biology; Virology; Genotype; Genetics; Gene; Escherichia coli; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001560027,0.0003473041,0.0002191424,0.0006792073,0.001581647,0.001046243,0.000575254,0.0005116635,0.001286865],"category_scores_gemma":[0.0009491665,0.0002927489,0.0001285707,0.0007125319,0.0004713069,0.0002136275,0.0004687026,0.0007252563,0.0002515285],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004564839,"about_ca_system_score_gemma":0.005231049,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8226764,"about_ca_topic_score_gemma":0.8531383,"domain_scores_codex":[0.9996098,0.00001500829,0.00001970733,0.00007544974,0.0001471598,0.0001329587],"domain_scores_gemma":[0.99911,0.00005602211,0.00008266466,0.0000328626,0.000463634,0.0002546702],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000977452,0.0003251885,0.7961079,0.0001993295,0.00005859436,0.01481709,0.006282566,0.0002841753,0.1425253,0.0002414478,0.00286698,0.03531394],"study_design_scores_gemma":[0.00003412935,0.000273718,0.9776178,0.00006460992,0.00003289483,0.006556786,0.004301614,0.0003828123,0.006660396,0.0000269947,0.00401834,0.00002982299],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977841,0.0001078683,0.0001340724,0.00009248767,0.00001034756,0.000048411,0.0002309599,0.0000100835,0.001581709],"genre_scores_gemma":[0.9969023,0.0001575496,0.0002730195,0.0001500887,0.000005022981,0.00001486073,0.0004649494,0.000005957621,0.002026177],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1773236,"threshold_uncertainty_score":0.3567358,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005706650482373094,"score_gpt":0.2039086141855042,"score_spread":0.1982019637031311,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}