{"id":"W3010232014","doi":"10.1016/j.ijantimicag.2020.105936","title":"Spread of multidrug-resistant IncHI1 plasmids carrying ESBL gene blaCTX-M-1 and metabolism operon of prebiotic oligosaccharides in commensal Escherichia coli from healthy horses, France","year":2020,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal","funders":"Institut Français; Institut National de la Recherche Agronomique","keywords":"Biology; Plasmid; Microbiology; Escherichia coli; Operon; Multiple drug resistance; Multilocus sequence typing; Polymerase chain reaction; Typing; Virulence; Gene; Genetics; Drug resistance; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002982063,0.0003785969,0.0004154591,0.0008504936,0.0005861084,0.000560901,0.0004291439,0.000609455,0.001044107],"category_scores_gemma":[0.0005655382,0.0001997722,0.00045591,0.0003445743,0.0002614689,0.0001754588,0.0003775065,0.0004849075,0.0003099435],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004926348,"about_ca_system_score_gemma":0.0003351232,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01258163,"about_ca_topic_score_gemma":0.006060121,"domain_scores_codex":[0.9994134,0.0001072981,0.00003718209,0.000161662,0.000117454,0.0001630667],"domain_scores_gemma":[0.9996419,0.0001111212,0.00004070995,0.00003881049,0.0001067293,0.0000606702],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001219202,0.0005710346,0.03474248,0.0001098812,0.00006187138,0.0009234881,0.001702917,0.0002512426,0.9514841,0.0003331041,0.0003006886,0.008300036],"study_design_scores_gemma":[0.00007976894,0.004157019,0.693415,0.00005623821,0.0002002721,0.003053053,0.003362325,0.00219554,0.2884834,0.0001733846,0.004756554,0.00006729215],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986798,0.0001411795,0.0002485854,0.0000369256,0.000009662135,0.00003002417,0.0002156782,0.000006973373,0.000631138],"genre_scores_gemma":[0.9949694,0.0001487529,0.0007932454,0.0000530377,0.00001491769,0.00001978105,0.001128839,0.00001023639,0.002861788],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01258163,"threshold_uncertainty_score":0.02501678,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01329844713507157,"score_gpt":0.2602585348968586,"score_spread":0.2469600877617871,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}