{"id":"W3010789078","doi":"10.1093/gbe/evaa057","title":"Recombination Rate Variation and Infrequent Sex Influence Genetic Diversity in Chlamydomonas reinhardtii","year":2020,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Linkage disequilibrium; Recombination; Genetics; Nucleotide diversity; Evolutionary biology; Balancing selection; Natural selection; Effective population size; Population; Ectopic recombination; Negative selection; Genome evolution; Gene conversion; Genome; Genetic variation; Genetic recombination; Gene; Single-nucleotide polymorphism; Allele; Genotype; Haplotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001986865,0.0001079712,0.0001083958,0.00003897606,0.0001389438,0.000008941893,0.00007146359,0.0001958657,0.000005863485],"category_scores_gemma":[0.00007765881,0.0001169182,0.0000191391,0.0000942906,0.0001020827,0.00000819713,0.0002207316,0.0000817425,0.000005790367],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003364904,"about_ca_system_score_gemma":0.00003164197,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001020382,"about_ca_topic_score_gemma":0.00006784756,"domain_scores_codex":[0.9991521,0.0001312725,0.0001708856,0.0003470448,0.00003705933,0.0001616159],"domain_scores_gemma":[0.999701,0.000008264907,0.00006905488,0.00009630562,0.0000467354,0.000078663],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001099051,0.00002663143,0.4834367,0.000025973,0.00002434508,0.000001426947,0.0004976249,0.001554257,0.5123389,0.001091085,0.00002787092,0.0008653094],"study_design_scores_gemma":[0.0006164939,0.000269411,0.9923958,0.000002869109,0.00001044381,0.000006816135,0.00003317952,0.003761966,0.000221203,0.00188063,0.0006610671,0.0001401873],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882677,0.001101659,0.009804787,0.0004858481,0.00005185068,0.0001649554,0.00001358469,0.00001242652,0.00009714533],"genre_scores_gemma":[0.9980747,0.0008299841,0.0004330632,0.0004119921,0.00006274591,0.000007873276,0.000119406,0.000005494129,0.00005471152],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5121177,"threshold_uncertainty_score":0.4767787,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008678310116429114,"score_gpt":0.2197661090903865,"score_spread":0.2110877989739574,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}