{"id":"W3011573990","doi":"10.1016/j.ijpara.2020.01.003","title":"Hiding in plain sight: discovery and phylogeography of a cryptic species of Trichinella (Nematoda: Trichinellidae) in wolverine (Gulo gulo)","year":2020,"lang":"en","type":"article","venue":"International Journal for Parasitology","topic":"Parasitic Diseases Research and Treatment","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"ca_institutions":"Government of Northwest Territories; Canadian Food Inspection Agency; University of Alberta; Yukon Department of Environment; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Food Inspection Agency; Istituto Superiore di Sanità; University of Saskatchewan","keywords":"Subclade; Trichinella; Biology; Trichinella spiralis; Phylogenetic tree; Mitochondrial DNA; Zoology; Phylogeography; Genome; Evolutionary biology; Polymerase chain reaction; Clade; Genetics; Helminths; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001086365,0.0001795841,0.000143485,0.000394079,0.0003803081,0.0003770879,0.0003268172,0.0002028488,0.0002722335],"category_scores_gemma":[0.0002329723,0.0001319871,0.0001326883,0.0003408904,0.0004451706,0.0001781848,0.0003087708,0.0001967829,0.00009520978],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007040758,"about_ca_system_score_gemma":0.0006324644,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.07826091,"about_ca_topic_score_gemma":0.2196064,"domain_scores_codex":[0.9998953,0.000007217565,0.000004460629,0.00005050394,0.000021325,0.00002114483],"domain_scores_gemma":[0.9998432,0.00002082556,0.00006163568,0.00001167627,0.00002377949,0.00003873348],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001975759,0.00007333079,0.5391637,0.0001026925,0.00003822899,0.0003995839,0.001920278,0.0007167428,0.4279347,0.0001832526,0.0000955987,0.02917426],"study_design_scores_gemma":[0.000005452452,0.0001972206,0.9719394,0.00002055951,0.00004001213,0.0008708341,0.00105955,0.002196635,0.0214841,0.00005640129,0.002116713,0.00001303477],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99855,0.0001068605,0.0009000534,0.00001506153,5.891775e-7,0.00001271345,0.0001652084,0.000008882704,0.0002406081],"genre_scores_gemma":[0.9919474,0.0002220311,0.006679775,0.00002912097,0.000001003604,0.00001803741,0.0007332032,0.000006679957,0.0003629186],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07826091,"threshold_uncertainty_score":0.1556107,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03196235321363141,"score_gpt":0.3709381288514765,"score_spread":0.3389757756378451,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}