{"id":"W3011866243","doi":"10.1182/blood.2019002385","title":"Coding and noncoding drivers of mantle cell lymphoma identified through exome and genome sequencing","year":2020,"lang":"en","type":"article","venue":"Blood","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":69,"is_retracted":false,"has_abstract":true,"ca_institutions":"Jewish General Hospital; Canada's Michael Smith Genome Sciences Centre; Simon Fraser University","funders":"Canadian Institutes of Health Research","keywords":"Exome sequencing; Biology; Exome; Mantle cell lymphoma; Genetics; Exon; Cancer research; Lymphoma; Gene; Mutation; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002833296,0.0002244219,0.0002273518,0.0008406791,0.0001751208,0.0004649909,0.0001916289,0.0003694079,0.001273274],"category_scores_gemma":[0.0007046453,0.0001282474,0.0002933972,0.000756003,0.0001547941,0.0001839008,0.0004676077,0.0003149011,0.0002349364],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001765356,"about_ca_system_score_gemma":0.0001405509,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006007677,"about_ca_topic_score_gemma":0.001782677,"domain_scores_codex":[0.9997602,0.00003165358,0.00001943643,0.00009395801,0.00005825868,0.00003651556],"domain_scores_gemma":[0.9997185,0.0001091193,0.00009028558,0.00003886377,0.00001858908,0.00002456171],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009339991,0.00007261035,0.1810946,0.0003900107,0.0006092522,0.004612625,0.0005136107,0.002304301,0.7391577,0.001824586,0.00178591,0.06670085],"study_design_scores_gemma":[0.00008516558,0.0002064648,0.8888752,0.0001446095,0.0007158839,0.009519937,0.0003320321,0.008990394,0.06577673,0.002895232,0.02240854,0.00004983366],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9872594,0.001333862,0.005103483,0.0001347059,0.00001272986,0.00002025756,0.005151724,0.00006830306,0.000915568],"genre_scores_gemma":[0.9869175,0.0008848901,0.004601414,0.0002104366,0.00001897557,0.00003213832,0.006550646,0.00004546884,0.0007385718],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001273274,"threshold_uncertainty_score":0.004259527,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02119271244594589,"score_gpt":0.2386409658887554,"score_spread":0.2174482534428095,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}