{"id":"W3011975877","doi":"10.1186/s13104-020-04987-6","title":"Transcriptome profiling of pluripotent pig embryonic stem cells originating from uni- and biparental embryos","year":2020,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Biotechnology Research Institute","funders":"National Research Foundation of Korea; Rural Development Administration; National Research Foundation","keywords":"Embryonic stem cell; Transcriptome; Induced pluripotent stem cell; Embryo; Biology; Cell biology; Rex1; Andrology; Computational biology; Genetics; Medicine; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008853112,0.0002248186,0.0003103777,0.000139839,0.0001764878,0.00007410903,0.0005367683,0.0001797313,0.00003155926],"category_scores_gemma":[0.0002880699,0.0002100188,0.0001228124,0.0003829259,0.000345358,0.00001463091,0.0004747735,0.0004379487,0.00003191728],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003690527,"about_ca_system_score_gemma":0.000333125,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002035638,"about_ca_topic_score_gemma":0.00004234883,"domain_scores_codex":[0.99682,0.0004228208,0.0003664388,0.0007726114,0.0009139585,0.0007041719],"domain_scores_gemma":[0.9985268,0.0002939231,0.00008290201,0.0004066285,0.000311559,0.0003782089],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002753506,0.00007085813,0.009254573,0.0002989763,0.00006344923,0.00001224883,0.0002042478,0.0001229549,0.9880737,0.00007507893,0.0001928077,0.001355737],"study_design_scores_gemma":[0.0009379935,0.0005613532,0.001034499,0.00006735751,0.00001173545,0.000002910051,0.0006678923,0.003120729,0.9914905,0.00004346865,0.001849442,0.0002120732],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9940379,0.002824741,0.001558641,0.0003651801,0.00007373651,0.000684033,0.0001721644,0.00002230026,0.0002612867],"genre_scores_gemma":[0.9963804,0.0006447549,0.002230196,0.00003708244,0.0002643796,0.00004284514,0.00009429581,0.00004903116,0.0002570511],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008220074,"threshold_uncertainty_score":0.8564318,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1062976920303989,"score_gpt":0.3452250038891079,"score_spread":0.238927311858709,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}